Non-Coding RNA Search

Ss1.1-rpigcf0_010948.5

Sequence:


               
               ATTCGAATTCGGAAAGAAATGGGGATTTAGAAGTGGAATGAAGGACTTTAAAAGGTATTA
GAATCAATGAAGTACAGGGACCTTTGGGGTCAAATATTTTTACTGGAATTGGAATATTAG
AGAGAGAAAGCTACAAAGATAGTAGGTAGTAACTAGAAAATCAGAGGGTAAGCTGCTGAT
AGGGAATGTCCAGTGCTTTAAACTGGAATAAAGGTGCTTACTGGGTTTTCTTAGTGGCTG
TAATAATTATTTTGATGGATTGATTTGTTAGGTTCATGACTACAAAGAAGGAACCCCAGA
AGAGAAGACCTACTATATAGAATTATGGGATGTTGGAGGCTCGGTGGGCAGTGCCAGCAG
TGTGAAAAGCACAAGAGCAGTATTCTACAACTCTGTAAATGGTAAAGCATTTTTTATTTT
TACCACCCATTAATGGTCTTGGAATATAGATCATCTGACATGAATGCTATGAATGCTGGA
CTCAATTTAAGAGAGATTAATATATTCACAACTCTTAATTTAAATCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTCGAATTCGGAAAGAAATGGGGATTTAGAAGTGGAATGAAGGACTTTAAAAGGTATTA
GAATCAATGAAGTACAGGGACCTTTGGGGTCAAATATTTTTACTGGAATTGGAATATTAG
AGAGAGAAAGCTACAAAGATAGTAGGTAGTAACTAGAAAATCAGAGGGTAAGCTGCTGAT
AGGGAATGTCCAGTGCTTTAAACTGGAATAAAGGTGCTTACTGGGTTTTCTTAGTGGCTG
TAATAATTATTTTGATGGATTGATTTGTTAGGTTCATGACTACAAAGAAGGAACCCCAGA
AGAGAAGACCTACTATATAGAATTATGGGATGTTGGAGGCTCGGTGGGCAGTGCCAGCAG
TGTGAAAAGCACAAGAGCAGTATTCTACAACTCTGTAAATGGTAAAGCATTTTTTATTTT
TACCACCCATTAATGGTCTTGGAATATAGATCATCTGACATGAATGCTATGAATGCTGGA
CTCAATTTAAGAGAGATTAATATATTCACAACTCTTAATTTAAATCTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               303-518, gnl|bosTau2|chr1 (30985552-30985351)
               

               
               303-518, gnl|Hg17|chr3 (121911415-121911186)
               

               
               303-518, gnl|Mm7|chr16 (37265231-37265430)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               303-518, gnl|bosTau2|chr1 (30985552-30985351)
               

               
               303-518, gnl|Hg17|chr3 (121911415-121911186)
               

               
               303-518, gnl|Mm7|chr16 (37265231-37265430)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.459207)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.459207)

	303-518, gnl\|bosTau2\|chr1 (30985552-30985351)
	303-518, gnl\|Hg17\|chr3 (121911415-121911186)
	303-518, gnl\|Mm7\|chr16 (37265231-37265430)