Non-Coding RNA Search

Ss1.1-rpigcf0_011841.5.5

Sequence:


               
               CAATGAAGAAAAAACAAGTCTCTTCAATAAGTGATGCTAGGAAAACTAGACAGCTACATG
TAAAAGAATGAAATTATAACACTCACTATCATCATATACGAAAATAAACTCAAAATGGAT
TAAAGACCTAAGTATAAGACTAGATACTACAGAACTCCTAAAGGAAAACATTTTGACATA
AATAACAGCAGTATTTTGGGGATCTGTCTCCTAGAATAATGAAAATAAAAACAAAAATAA
ACAAATGGGACCTGATTAAACTTAAAAGCTTTTGCACAGCAAAGGAAATCATAAATAAAA
AGACAACTCACAGAATGGAAGAAAATACTTACAAACGATGCAACTGACAAGGGATTAATT
TTCAAAATATACAAACAGTTCATACAGCTCAATATCAAAAAACAAACAACACAATCAGAA
AATGAACAGAATGGAAATCCTGTGAAATTAGATTGTTACGATCATTATACAGCTACAGAT
GTGATAAATTCATTTGAGTAATTTAAATAAATAAATAAATAAATAAATTTAAAAAAAAGA
AAAAGAAAATGAACAGAAGACCTAAATAGATATGCCTCCAAAGAAGACATACTGATGATT
ATCAGGCAGATGAAAAATCGATTCCTGCAGCCCGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAATGAAGAAAAAACAAGTCTCTTCAATAAGTGATGCTAGGAAAACTAGACAGCTACATG
TAAAAGAATGAAATTATAACACTCACTATCATCATATACGAAAATAAACTCAAAATGGAT
TAAAGACCTAAGTATAAGACTAGATACTACAGAACTCCTAAAGGAAAACATTTTGACATA
AATAACAGCAGTATTTTGGGGATCTGTCTCCTAGAATAATGAAAATAAAAACAAAAATAA
ACAAATGGGACCTGATTAAACTTAAAAGCTTTTGCACAGCAAAGGAAATCATAAATAAAA
AGACAACTCACAGAATGGAAGAAAATACTTACAAACGATGCAACTGACAAGGGATTAATT
TTCAAAATATACAAACAGTTCATACAGCTCAATATCAAAAAACAAACAACACAATCAGAA
AATGAACAGAATGGAAATCCTGTGAAATTAGATTGTTACGATCATTATACAGCTACAGAT
GTGATAAATTCATTTGAGTAATTTAAATAAATAAATAAATAAATAAATTTAAAAAAAAGA
AAAAGAAAATGAACAGAAGACCTAAATAGATATGCCTCCAAAGAAGACATACTGATGATT
ATCAGGCAGATGAAAAATCGATTCCTGCAGCCCGGG

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               1-240, gnl|bosTau2|chr1 (31239122-31238877)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-240, gnl|bosTau2|chr1 (31239122-31238877)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (38.1142)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (38.1142)