Non-Coding RNA Search

Ss1.1-rpigcf0_013818.5

Sequence:


               
               TTTTATCTCAAAGCATATTTTATTTAGTATGTCTTATTTTTTCGAGTCTCAGGATTGTTT
TGTTTTCCAATGTTTAAGGTTTGTTGATTTACAAGGTAGTGATAATTTTTGCTGTACAAC
AGTGATTCAATTATACATGTACACACATCCATTCTCTTTCAGATTCTTTTCCCACATAGA
TTATCACAGAATATTGGGTAGAGTTCTCTGTGCTATACAGCAGGTCCCGGTTGGCCAATC
ATTCCATATACGTCAGTATGCATATGCCAGTCCCAGACCCCCAGTCCATCTCTCCCCCCA
TCTGTCCCCTTTGGTAACCATAAGTTTTTTGAAATCTGTGAGTCTGTTTCTGTTCTTCAA
ATAAGTTCATTTTTATCCTTTCATTAGATTACACATATAAGTGATATCATATGATGTCTG
TCTTTCTCTGTCTTCACTTAGTATGATAATCTAGGTCCATTCATGTTGCTGCAAATGATA
TTATTTCATTCTTCTTTGTGGATGAATAATTCTTTGTTTATTACTAGTAAACATTTTTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTATCTCAAAGCATATTTTATTTAGTATGTCTTATTTTTTCGAGTCTCAGGATTGTTT
TGTTTTCCAATGTTTAAGGTTTGTTGATTTACAAGGTAGTGATAATTTTTGCTGTACAAC
AGTGATTCAATTATACATGTACACACATCCATTCTCTTTCAGATTCTTTTCCCACATAGA
TTATCACAGAATATTGGGTAGAGTTCTCTGTGCTATACAGCAGGTCCCGGTTGGCCAATC
ATTCCATATACGTCAGTATGCATATGCCAGTCCCAGACCCCCAGTCCATCTCTCCCCCCA
TCTGTCCCCTTTGGTAACCATAAGTTTTTTGAAATCTGTGAGTCTGTTTCTGTTCTTCAA
ATAAGTTCATTTTTATCCTTTCATTAGATTACACATATAAGTGATATCATATGATGTCTG
TCTTTCTCTGTCTTCACTTAGTATGATAATCTAGGTCCATTCATGTTGCTGCAAATGATA
TTATTTCATTCTTCTTTGTGGATGAATAATTCTTTGTTTATTACTAGTAAACATTTTTTA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               30-508, gnl|bosTau2|chr1 (29935145-29935621)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               30-508, gnl|bosTau2|chr1 (29935145-29935621)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               ctl (1.37762)
               

               
               cte (0.29274)
               

               
               ill (0.175593)
               

               
               bla (0.124347)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (1.37762)
               

               
               cte (0.29274)
               

               
               ill (0.175593)
               

               
               bla (0.124347)