Non-Coding RNA Search

Ss1.1-rpigcf0_014254.5

Sequence:


               
               TTCCTGTGATTGAGAATCAGAATTTAATTTGGCGGCGCTGGCTTTGACGTGCCCGTGTCG
GCTGCACAGGAGCCTCCCATCAACCGAAGATAGAGCTGCTCTTCCCCATCTCTGGGGAAA
CTTAAAAGAAGACAGATTATAACGCAAGAAAATTATACAGCCTCGGTATAATGAAAGAGA
TAAAACATGATTGGATTAGCCTGTTGAAATAACAGCAGACAGCAAAGCAATAATATTAAG
CCAAACAAGGGCCTGGACCCATCAGCTCAACTGCAGGGGACCTGGGGGTGCAGGAAGACA
GAGTCGCCACGCTTGCCGCAGCAACCCCTGAGCAAGAAGCATCGGCTCCTTCTGTGGTTG
CTCTAGTGGCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCCTGTGATTGAGAATCAGAATTTAATTTGGCGGCGCTGGCTTTGACGTGCCCGTGTCG
GCTGCACAGGAGCCTCCCATCAACCGAAGATAGAGCTGCTCTTCCCCATCTCTGGGGAAA
CTTAAAAGAAGACAGATTATAACGCAAGAAAATTATACAGCCTCGGTATAATGAAAGAGA
TAAAACATGATTGGATTAGCCTGTTGAAATAACAGCAGACAGCAAAGCAATAATATTAAG
CCAAACAAGGGCCTGGACCCATCAGCTCAACTGCAGGGGACCTGGGGGTGCAGGAAGACA
GAGTCGCCACGCTTGCCGCAGCAACCCCTGAGCAAGAAGCATCGGCTCCTTCTGTGGTTG
CTCTAGTGGCTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-372, gnl|bosTau2|chr3 (59154632-59155003)
               

               
               4-372, gnl|Hg17|chr1 (57105423-57105795)
               

               
               4-372, gnl|Mm7|chr4 (104182353-104181985)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-372, gnl|bosTau2|chr3 (59154632-59155003)
               

               
               4-372, gnl|Hg17|chr1 (57105423-57105795)
               

               
               4-372, gnl|Mm7|chr4 (104182353-104181985)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.765345)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.765345)

	4-372, gnl\|bosTau2\|chr3 (59154632-59155003)
	4-372, gnl\|Hg17\|chr1 (57105423-57105795)
	4-372, gnl\|Mm7\|chr4 (104182353-104181985)