Non-Coding RNA Search

Ss1.1-rpigcf0_015226.5

Sequence:


               
               CGGGGAGCATGTAGAAAGGCAGGCAGGTGCCACCAACCACAAAGAACTTGAGAACTCCAG
GTAAAGGAGAAACCCTCTTCTCCCTCACCTTCTCCTACTTCTGGTACCTAGTGTTCCTTG
CCCAGCACAGAGACAGCTTGCTTGAGAGCTGTCAGTACTAGACTTTGTCTTCATTATGGC
CTTCATAGCTCTTGTTTGCCTTCCTACCGAATCAAGCCGCGTTTATAATATTATTTCTCT
GAGAAAATGAGTTTGGAGTTCCCAACAACTGACTTACAAATGAACTTTGTGTACGCAGCT
CATTCATAAGTTGAGGACTGCCTGTACCAGGCATGGAACCCAGAGACAACATTTATCTGT
GCTTTATCAGTATGGGCTTGTCAAGTTAGCTTATGTTTACTTTTCTTTGCCTTCCCTTTG
ATGATAGCCTTGCTCTTCAAATTTGAGACTGTCTTTATGTATTGAGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGGAGCATGTAGAAAGGCAGGCAGGTGCCACCAACCACAAAGAACTTGAGAACTCCAG
GTAAAGGAGAAACCCTCTTCTCCCTCACCTTCTCCTACTTCTGGTACCTAGTGTTCCTTG
CCCAGCACAGAGACAGCTTGCTTGAGAGCTGTCAGTACTAGACTTTGTCTTCATTATGGC
CTTCATAGCTCTTGTTTGCCTTCCTACCGAATCAAGCCGCGTTTATAATATTATTTCTCT
GAGAAAATGAGTTTGGAGTTCCCAACAACTGACTTACAAATGAACTTTGTGTACGCAGCT
CATTCATAAGTTGAGGACTGCCTGTACCAGGCATGGAACCCAGAGACAACATTTATCTGT
GCTTTATCAGTATGGGCTTGTCAAGTTAGCTTATGTTTACTTTTCTTTGCCTTCCCTTTG
ATGATAGCCTTGCTCTTCAAATTTGAGACTGTCTTTATGTATTGAGAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               177-468, gnl|bosTau2|chr23 (35677305-35677596)
               

               
               177-468, gnl|Hg17|chr6 (16676761-16676471)
               

               
               177-468, gnl|Mm7|chr13 (45225500-45225215)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               177-468, gnl|bosTau2|chr23 (35677305-35677596)
               

               
               177-468, gnl|Hg17|chr6 (16676761-16676471)
               

               
               177-468, gnl|Mm7|chr13 (45225500-45225215)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.612276)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.612276)

	177-468, gnl\|bosTau2\|chr23 (35677305-35677596)
	177-468, gnl\|Hg17\|chr6 (16676761-16676471)
	177-468, gnl\|Mm7\|chr13 (45225500-45225215)