Non-Coding RNA Search

Ss1.1-rpigcf0_016680.5

Sequence:


               
               GCTGCAGGAATTCGATTCCAGCCATCCATGTTTATAACTATGTTAGGAAGGAAAACCCAA
GGACTGATAAACTATAAGGCATTCTGTACCTCAGCACTACATGCTCATCACTGATAAATG
GCTTTACTAACCACGCACATGTGTGTGCGTGCACACACACTGAAATTTTGGATTTATTTA
CATTTTTGATGTATCTATTTATGAACCTTTGATTAAATCACAAAAAGTTTCTGTCAAATC
TACTATAATATAAAGAATATTTTTCTATTTCCCCCAACAAAATAGCTCAGAGGAAAATTA
ACATGAGACAGGAAAAATAAAAGTGTAGCTTAACTTGGTTATTGATACAAGATTTTATTG
GTCTTAAGGATTTAGAAATAATTTTTAGCTGTTATTACATAATACTCCTATGAAATAGGT
CAATATTATCATCTTCTGCTAAATAAAACACTACCAGCAGAGCTATTATAGCCCTCCTAG
TGAATGTCCTGAAAGTTTAATGTGGTATAAACTTCACTTTGTGCAGAGAAATCAATTCTT
TTAAAATAGGAATATAATAGTGAATTACATATGTAGATTCAGCCTTAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGCAGGAATTCGATTCCAGCCATCCATGTTTATAACTATGTTAGGAAGGAAAACCCAA
GGACTGATAAACTATAAGGCATTCTGTACCTCAGCACTACATGCTCATCACTGATAAATG
GCTTTACTAACCACGCACATGTGTGTGCGTGCACACACACTGAAATTTTGGATTTATTTA
CATTTTTGATGTATCTATTTATGAACCTTTGATTAAATCACAAAAAGTTTCTGTCAAATC
TACTATAATATAAAGAATATTTTTCTATTTCCCCCAACAAAATAGCTCAGAGGAAAATTA
ACATGAGACAGGAAAAATAAAAGTGTAGCTTAACTTGGTTATTGATACAAGATTTTATTG
GTCTTAAGGATTTAGAAATAATTTTTAGCTGTTATTACATAATACTCCTATGAAATAGGT
CAATATTATCATCTTCTGCTAAATAAAACACTACCAGCAGAGCTATTATAGCCCTCCTAG
TGAATGTCCTGAAAGTTTAATGTGGTATAAACTTCACTTTGTGCAGAGAAATCAATTCTT
TTAAAATAGGAATATAATAGTGAATTACATATGTAGATTCAGCCTTAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               18-588, gnl|bosTau2|chr3 (54605146-54604576)
               

               
               18-588, gnl|Hg17|chr7 (9700803-9701355)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-588, gnl|bosTau2|chr3 (54605146-54604576)
               

               
               18-588, gnl|Hg17|chr7 (9700803-9701355)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.459207)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.459207)

	18-588, gnl\|bosTau2\|chr3 (54605146-54604576)
	18-588, gnl\|Hg17\|chr7 (9700803-9701355)