Non-Coding RNA Search

Ss1.1-rpigcf0_016681.5

Sequence:


               
               CTGCAGGAATTCGAATTCATGCTAGCCAGCATGCGAAAAGTCTGGCTATCCCGAGATTGC
TGTGCTGTGGCTGCCACGTGGAGAGATTGATAGTCACCCAGCCAGTTCCCAGATGTTCTA
GACACGGCAGGCCATGCGAGTGAAGAAACCATCTTGGACATTTCAGCCCCAGCAGATGCC
ACAAGAAGAACCGAGGAACCAAGCCAGAGCCAAGGCCCAGGACACATGGCCACAGCTGAG
CATCCCAACCATCTCCAGCCATCTGAGCCTCGCAAGACGAGGTCTCAAGTATCATAAAGC
AGAGATAAGCCATCCACCATCCACGTGCCTTTCCTGAAATCCTAACCCACAGCATTTGAG
CATAATAAAAGGGTGGTTGTTTCATCTTAGCCGGAGAAGTATCAGAGAATCAATACAAGG
ACAGTTCTCAGAACAGAAGGAAAAAAGCCTGAGTCTCTGGGTCCACCAAGTACCCAGCAC
AGTGAATGACAAAGGATCCACCTCAAATATTGTCAGGAAACTTTAGGATGCCTGGGTAAA
TGAAAAATCCTCAACTACTCCAGAAAGAAAATATAAATACACCTGCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCAGGAATTCGAATTCATGCTAGCCAGCATGCGAAAAGTCTGGCTATCCCGAGATTGC
TGTGCTGTGGCTGCCACGTGGAGAGATTGATAGTCACCCAGCCAGTTCCCAGATGTTCTA
GACACGGCAGGCCATGCGAGTGAAGAAACCATCTTGGACATTTCAGCCCCAGCAGATGCC
ACAAGAAGAACCGAGGAACCAAGCCAGAGCCAAGGCCCAGGACACATGGCCACAGCTGAG
CATCCCAACCATCTCCAGCCATCTGAGCCTCGCAAGACGAGGTCTCAAGTATCATAAAGC
AGAGATAAGCCATCCACCATCCACGTGCCTTTCCTGAAATCCTAACCCACAGCATTTGAG
CATAATAAAAGGGTGGTTGTTTCATCTTAGCCGGAGAAGTATCAGAGAATCAATACAAGG
ACAGTTCTCAGAACAGAAGGAAAAAAGCCTGAGTCTCTGGGTCCACCAAGTACCCAGCAC
AGTGAATGACAAAGGATCCACCTCAAATATTGTCAGGAAACTTTAGGATGCCTGGGTAAA
TGAAAAATCCTCAACTACTCCAGAAAGAAAATATAAATACACCTGCCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               21-382, gnl|bosTau2|chr19 (18315775-18315408)
               

               
               21-382, gnl|Hg17|chr17 (2742725-2742387)
               

               
               21-382, gnl|Mm7|chr11 (74576822-74577154)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               21-382, gnl|bosTau2|chr19 (18315775-18315408)
               

               
               21-382, gnl|Hg17|chr17 (2742725-2742387)
               

               
               21-382, gnl|Mm7|chr11 (74576822-74577154)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.306138)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.306138)

	21-382, gnl\|bosTau2\|chr19 (18315775-18315408)
	21-382, gnl\|Hg17\|chr17 (2742725-2742387)
	21-382, gnl\|Mm7\|chr11 (74576822-74577154)