Non-Coding RNA Search

Ss1.1-rpigcf0_016727.5

Sequence:


               
               ACTATTTGCGTCGAAGCGCTCATCAGCCCTGCAACTTTCCCTTTCCCTCTTAGGGACTGA
TGACTAGGCTAGAGGCACCCAGGCGAGCCACTAGTTGCCCACAGGAACCTGTGTAAACCG
AGCTCTCGAGCGGCCGAGTTGAATGAAGTTATGACTCGGTTTGCTCTAATGGGTTATGGC
TTCTCAAATGTGAGTTAACAGTCCGAGTGCGCAGCTAGGTAGGCATAGCGCGACGCAGAG
TGTGGAGCCGCCGGCAAAGGCAGGGAGGGGTGCCACCGCAGCGGCTCCGCGCTCCGCGTC
CGCTCGGTGCTTCTTCCCCGGCGTCGCTTCCGCATCATCTGGGGTTCCCGGGCCACCAGT
GTGCCCGGGTGAGCGCGGCGGGGAACCGGAGCCGCCCGCTGGAGGAGCCGAGGCTGGGAT
TGAGAGCAGCGGGAGGGGGCTCTCCCAGGAAGCCCTGCGGTTAGCACCCGCGCCTCGCCA
CCAGTGGCTGCGCAGGCTGGGAAGTGGAGAGGTCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTATTTGCGTCGAAGCGCTCATCAGCCCTGCAACTTTCCCTTTCCCTCTTAGGGACTGA
TGACTAGGCTAGAGGCACCCAGGCGAGCCACTAGTTGCCCACAGGAACCTGTGTAAACCG
AGCTCTCGAGCGGCCGAGTTGAATGAAGTTATGACTCGGTTTGCTCTAATGGGTTATGGC
TTCTCAAATGTGAGTTAACAGTCCGAGTGCGCAGCTAGGTAGGCATAGCGCGACGCAGAG
TGTGGAGCCGCCGGCAAAGGCAGGGAGGGGTGCCACCGCAGCGGCTCCGCGCTCCGCGTC
CGCTCGGTGCTTCTTCCCCGGCGTCGCTTCCGCATCATCTGGGGTTCCCGGGCCACCAGT
GTGCCCGGGTGAGCGCGGCGGGGAACCGGAGCCGCCCGCTGGAGGAGCCGAGGCTGGGAT
TGAGAGCAGCGGGAGGGGGCTCTCCCAGGAAGCCCTGCGGTTAGCACCCGCGCCTCGCCA
CCAGTGGCTGCGCAGGCTGGGAAGTGGAGAGGTCAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-476, gnl|bosTau2|chr15 (37195674-37196141)
               

               
               7-476, gnl|Hg17|chr11 (27700427-27700873)
               

               
               7-476, gnl|Mm7|chr2 (109525235-109524804)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-476, gnl|bosTau2|chr15 (37195674-37196141)
               

               
               7-476, gnl|Hg17|chr11 (27700427-27700873)
               

               
               7-476, gnl|Mm7|chr2 (109525235-109524804)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (1.07148)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (1.07148)

	7-476, gnl\|bosTau2\|chr15 (37195674-37196141)
	7-476, gnl\|Hg17\|chr11 (27700427-27700873)
	7-476, gnl\|Mm7\|chr2 (109525235-109524804)