Non-Coding RNA Search

Ss1.1-rpigcf0_016929.5

Sequence:


               
               TGAAGAGACTTCTTGGCGGTATTGCTGACTGCTGTAACGGTGCGGGCATCTCGTGGTAGA
GGTCCTTGAAATTTTGGTCCCCTGGTCAGGAAGAAAGGGTGGGAGCTTCGGCTTGAGCCT
GGGCCCCAGGCTTTTGCCTTTGCTCTTTCCTGTCACCAAGACACTCTCCACGGCTCTCTT
TAGTGCTTTTTTAATGCCTTCCTTGAACTGTTTAATTGGATTGCATCACACTAAACATTT
GAAAAGAATTCAAGCACCAGCTGCCAGGCTCTCTTTTAATGAACATTCTGTATGTCATTG
TTTGCCAAAAAAGTCCTGCATTGGATAGAAATCGGGAGGTTGAATGAAGAAATGAAAATA
CCTATTTTTCTTGTGTTCTTTACCATACAACTGCTTATTTCCACAAGTCATGTTTTGTTT
CCATCTAGTCATGGTGGACTGTTTTCCCAAGTATAGAAGTTAGCCAAATGGCTGTCCACT
TAGACCCTATGTAATTGCTTGCCATTGCATTCTATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAAGAGACTTCTTGGCGGTATTGCTGACTGCTGTAACGGTGCGGGCATCTCGTGGTAGA
GGTCCTTGAAATTTTGGTCCCCTGGTCAGGAAGAAAGGGTGGGAGCTTCGGCTTGAGCCT
GGGCCCCAGGCTTTTGCCTTTGCTCTTTCCTGTCACCAAGACACTCTCCACGGCTCTCTT
TAGTGCTTTTTTAATGCCTTCCTTGAACTGTTTAATTGGATTGCATCACACTAAACATTT
GAAAAGAATTCAAGCACCAGCTGCCAGGCTCTCTTTTAATGAACATTCTGTATGTCATTG
TTTGCCAAAAAAGTCCTGCATTGGATAGAAATCGGGAGGTTGAATGAAGAAATGAAAATA
CCTATTTTTCTTGTGTTCTTTACCATACAACTGCTTATTTCCACAAGTCATGTTTTGTTT
CCATCTAGTCATGGTGGACTGTTTTCCCAAGTATAGAAGTTAGCCAAATGGCTGTCCACT
TAGACCCTATGTAATTGCTTGCCATTGCATTCTATC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-485, gnl|bosTau2|chr3 (59871712-59871224)
               

               
               1-485, gnl|Hg17|chr1 (57708679-57708235)
               

               
               1-485, gnl|Mm7|chr4 (103645802-103646290)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-485, gnl|bosTau2|chr3 (59871712-59871224)
               

               
               1-485, gnl|Hg17|chr1 (57708679-57708235)
               

               
               1-485, gnl|Mm7|chr4 (103645802-103646290)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ctl (1.07148)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (1.07148)

	1-485, gnl\|bosTau2\|chr3 (59871712-59871224)
	1-485, gnl\|Hg17\|chr1 (57708679-57708235)
	1-485, gnl\|Mm7\|chr4 (103645802-103646290)