Non-Coding RNA Search

Ss1.1-rpigcf0_016949.5

Sequence:


               
               TTTTATTTATAAAATTTCACATGAAATAATATTGATATATCAAGTGTACTATCAGTCACC
TAGTAGGAAAACCATCCTAAGTATTTGGAATCTTTAAATAGTGGGTTTTTACTCAGAGGA
TATGTGTAATCTCTTTGCATTCTCAACAGATGTTGGAGAGTTAACACTGTTGTATTTCAA
AAGAAATGGATGCATTTACTACAAAGTACAGTAATATGGTTCTTTTGATCATTGTATTAT
GATTTAACTCAGACAACTTCATTGTTTGTGCAATTTCTCCAAACTCATGAAAGATGATAT
ATATATCCCTCAGGCAAAAAACCAACACTCCGGATAGGGCACTGGGTTATTTAACCACCC
TGATAAATAATTTACACTTGGGGATATTATGCAGAAACCTTTTCAATTAACTTGTGTTGA
CAGAGAAAGTAAATATAGTAGTTGATGAAAAAAAAATTTAAGACATTTTTGTCCTAAAAC
ATGGAAAAAAATCTCATTTAGGAGTTCCTGTAGTGGTTCAGTGGACATAAATCTTACTAG
TATCCATGAGAACACAAGTTTGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTATTTATAAAATTTCACATGAAATAATATTGATATATCAAGTGTACTATCAGTCACC
TAGTAGGAAAACCATCCTAAGTATTTGGAATCTTTAAATAGTGGGTTTTTACTCAGAGGA
TATGTGTAATCTCTTTGCATTCTCAACAGATGTTGGAGAGTTAACACTGTTGTATTTCAA
AAGAAATGGATGCATTTACTACAAAGTACAGTAATATGGTTCTTTTGATCATTGTATTAT
GATTTAACTCAGACAACTTCATTGTTTGTGCAATTTCTCCAAACTCATGAAAGATGATAT
ATATATCCCTCAGGCAAAAAACCAACACTCCGGATAGGGCACTGGGTTATTTAACCACCC
TGATAAATAATTTACACTTGGGGATATTATGCAGAAACCTTTTCAATTAACTTGTGTTGA
CAGAGAAAGTAAATATAGTAGTTGATGAAAAAAAAATTTAAGACATTTTTGTCCTAAAAC
ATGGAAAAAAATCTCATTTAGGAGTTCCTGTAGTGGTTCAGTGGACATAAATCTTACTAG
TATCCATGAGAACACAAGTTTGAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-500, gnl|bosTau2|chr11 (60523532-60524018)
               

               
               1-500, gnl|Hg17|chr2 (18645474-18645956)
               

               
               1-500, gnl|Mm7|chr12 (10442766-10442277)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-500, gnl|bosTau2|chr11 (60523532-60524018)
               

               
               1-500, gnl|Hg17|chr2 (18645474-18645956)
               

               
               1-500, gnl|Mm7|chr12 (10442766-10442277)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.306138)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.306138)

	1-500, gnl\|bosTau2\|chr11 (60523532-60524018)
	1-500, gnl\|Hg17\|chr2 (18645474-18645956)
	1-500, gnl\|Mm7\|chr12 (10442766-10442277)