Non-Coding RNA Search

Ss1.1-rpigcf0_017633.5

Sequence:


               
               CAGGAATTCGAATTCCAGAAATATCCTCAGTTGAAAATCCCTGCTCTACACGTAAAAAAA
GAATAGCTGTATAACTCTTCCCTGTCCCTTCAACATAGGAAGACAGATGATTTGATAATC
ACATGATGATAACATTTAATAAACAAATCTCACCTAAAAGTTAGATGATCGTGCTGAGTA
ATAGGCATGGAACCTCCTCACATAAGTGGGACAAGGAACCTGATCAGTTATAATCTCGTG
TTTTCCCTTCCCTTTTGTGGATGTTCAAATCCTACCAGTCTTTGAGAATCAAGTCAAAGC
TTACCTCTTCAAAAAAGCACAAATAGAGAAGTACTGTTTCTGTTTCTCTGATAAGTATCT
ACCATTTTAAAATTATTTTAAAATAAATAATTAAAAAAAGAATGTATACATGTATGTGTA
ACTGGGTCACCTTGCTGTACAGTAGAAAATTGATGTAACACTGTAACCCAGCTATAATAG
AAAAAATAAAAATCATCATAAAAAATAAATTCATTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGGAATTCGAATTCCAGAAATATCCTCAGTTGAAAATCCCTGCTCTACACGTAAAAAAA
GAATAGCTGTATAACTCTTCCCTGTCCCTTCAACATAGGAAGACAGATGATTTGATAATC
ACATGATGATAACATTTAATAAACAAATCTCACCTAAAAGTTAGATGATCGTGCTGAGTA
ATAGGCATGGAACCTCCTCACATAAGTGGGACAAGGAACCTGATCAGTTATAATCTCGTG
TTTTCCCTTCCCTTTTGTGGATGTTCAAATCCTACCAGTCTTTGAGAATCAAGTCAAAGC
TTACCTCTTCAAAAAAGCACAAATAGAGAAGTACTGTTTCTGTTTCTCTGATAAGTATCT
ACCATTTTAAAATTATTTTAAAATAAATAATTAAAAAAAGAATGTATACATGTATGTGTA
ACTGGGTCACCTTGCTGTACAGTAGAAAATTGATGTAACACTGTAACCCAGCTATAATAG
AAAAAATAAAAATCATCATAAAAAATAAATTCATTT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               16-205, gnl|bosTau2|chr20 (17132349-17132157)
               

               
               16-205, gnl|Hg17|chr5 (49756275-49756086)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-205, gnl|bosTau2|chr20 (17132349-17132157)
               

               
               16-205, gnl|Hg17|chr5 (49756275-49756086)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ctl (1.53069)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (1.53069)

	16-205, gnl\|bosTau2\|chr20 (17132349-17132157)
	16-205, gnl\|Hg17\|chr5 (49756275-49756086)