Non-Coding RNA Search

Ss1.1-rpigcf0_017654.5

Sequence:


               
               ATTCGAATTCGAAGGCATTTCCACGTTCACTGTCGATAAGAGTAGTTGAATGGAATGATT
ATTTTTTTAGGATGCAGAAGGCCTCCTTACCAAATATCTACTAGTATCTCTATATTCCTC
CCCAGTCTGCCCCCAATTAAAAGTATATTATCTTCTCTACTGAAGTTGGGATAATTGGTG
GTTATTTTCAGAGCAACTCATTGGGATGATAGAGATTGATTATTTTTAATTGAGGTAGCG
GAGGTGTTGAACACTCATTGGGCACCGAGTAAATGTTGTGACGATTGCAATTTCCCAAAC
CATGTGTCTGATAAACATCATGTCTTCAACATTTCCAAACAGCCAAAGTCACTTCTCCCC
CATCCAGTCATTCCCTCTTCTCACTTTAACATTCAGTCTCCTATAAGTTTATGCTTCTGT
TCACATCCAATTAGTTTAGAAAAATATTTGTCTGAAAAATATATCTATTCTTGAGTCAGA
AACCTACATTTCTGTGACTATCAGAAGGGAAACAGAACAGATGGACAGAGTGCCTATTTC
CTTTTGCACCTTTAGTCTAATATGCAGCAGCTTATCTGCCTCAACACAAGGTTTCTCTTC
CTCCTGTCCCCATATCCTTTGTAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTCGAATTCGAAGGCATTTCCACGTTCACTGTCGATAAGAGTAGTTGAATGGAATGATT
ATTTTTTTAGGATGCAGAAGGCCTCCTTACCAAATATCTACTAGTATCTCTATATTCCTC
CCCAGTCTGCCCCCAATTAAAAGTATATTATCTTCTCTACTGAAGTTGGGATAATTGGTG
GTTATTTTCAGAGCAACTCATTGGGATGATAGAGATTGATTATTTTTAATTGAGGTAGCG
GAGGTGTTGAACACTCATTGGGCACCGAGTAAATGTTGTGACGATTGCAATTTCCCAAAC
CATGTGTCTGATAAACATCATGTCTTCAACATTTCCAAACAGCCAAAGTCACTTCTCCCC
CATCCAGTCATTCCCTCTTCTCACTTTAACATTCAGTCTCCTATAAGTTTATGCTTCTGT
TCACATCCAATTAGTTTAGAAAAATATTTGTCTGAAAAATATATCTATTCTTGAGTCAGA
AACCTACATTTCTGTGACTATCAGAAGGGAAACAGAACAGATGGACAGAGTGCCTATTTC
CTTTTGCACCTTTAGTCTAATATGCAGCAGCTTATCTGCCTCAACACAAGGTTTCTCTTC
CTCCTGTCCCCATATCCTTTGTAC

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               11-554, gnl|bosTau2|chr22 (31097608-31098163)
               

               
               11-554, gnl|Hg17|chr3 (60568132-60568701)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-554, gnl|bosTau2|chr22 (31097608-31098163)
               

               
               11-554, gnl|Hg17|chr3 (60568132-60568701)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.306138)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.306138)

	11-554, gnl\|bosTau2\|chr22 (31097608-31098163)
	11-554, gnl\|Hg17\|chr3 (60568132-60568701)