Non-Coding RNA Search

Ss1.1-rpigcf0_018938.5

Sequence:


               
               CGGGCTGCAGGAATCGAATTCATGACAAGTCAGCCTTATTACTGTAAAATGTGCAGTGAT
TCCACTGAGTAATTATTCAAATATTTATATATGAAGTTTCCTTCTTTGCATTCAGCAAGT
ATAATAAAATGCTTATGAAAAATTAATGACTTAGCTACCGCATAATGCACAGTCTCTTTT
AGCCTATTTATATATAAAATGCCAAAGCAAACATTAAAAAAACATTTGCAAAGTACATTT
GGTAGCCCCCTCCTCAGCTCCCCCCACAAAGAAAACAGCAGCATGAAATAGCTCTGTGAT
GCTGTGCGCTTCATCTCCTCACGCTGACAGTACCTAGCTCATCTATGATGGAAGAATATG
ATCATTTAAATGCAACAAGAACATCTTTGTCGATGGGCCTGCCCCTTCCAACAGCAGCAC
AGAGCTCGAATTCATCTCCCCATTGGCTCGGCTTCCCGTAAAATGAAGGGAGTTGAGTAA
CCAAGGAGCCAGCTAGACCTTCCTCCCTTCCTGCACTTTGAGGGCCAGGTCTTTGCAAAT
TCCACCCTTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGGCTGCAGGAATCGAATTCATGACAAGTCAGCCTTATTACTGTAAAATGTGCAGTGAT
TCCACTGAGTAATTATTCAAATATTTATATATGAAGTTTCCTTCTTTGCATTCAGCAAGT
ATAATAAAATGCTTATGAAAAATTAATGACTTAGCTACCGCATAATGCACAGTCTCTTTT
AGCCTATTTATATATAAAATGCCAAAGCAAACATTAAAAAAACATTTGCAAAGTACATTT
GGTAGCCCCCTCCTCAGCTCCCCCCACAAAGAAAACAGCAGCATGAAATAGCTCTGTGAT
GCTGTGCGCTTCATCTCCTCACGCTGACAGTACCTAGCTCATCTATGATGGAAGAATATG
ATCATTTAAATGCAACAAGAACATCTTTGTCGATGGGCCTGCCCCTTCCAACAGCAGCAC
AGAGCTCGAATTCATCTCCCCATTGGCTCGGCTTCCCGTAAAATGAAGGGAGTTGAGTAA
CCAAGGAGCCAGCTAGACCTTCCTCCCTTCCTGCACTTTGAGGGCCAGGTCTTTGCAAAT
TCCACCCTTCCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               20-552, gnl|bosTau2|chr12 (16129225-16128694)
               

               
               20-552, gnl|Hg17|chr13 (31585424-31585954)
               

               
               20-552, gnl|Mm7|chr5 (149270771-149271289)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               20-552, gnl|bosTau2|chr12 (16129225-16128694)
               

               
               20-552, gnl|Hg17|chr13 (31585424-31585954)
               

               
               20-552, gnl|Mm7|chr5 (149270771-149271289)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.306138)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.306138)

	20-552, gnl\|bosTau2\|chr12 (16129225-16128694)
	20-552, gnl\|Hg17\|chr13 (31585424-31585954)
	20-552, gnl\|Mm7\|chr5 (149270771-149271289)