Non-Coding RNA Search

Ss1.1-rpigcf0_020253.5

Sequence:


               
               CTGCAGGAATTCGAATTCCAATTACTTATAATTTATCTCTAATTTAGGGAATTTCTTAAT
TTAAAAAATCTGAACAGTGTTCACAAGTTGGTGGTAATATTCTCACAATATGGAATCAAA
ATGTTATCCTCTCATGCCACATTTAAAATTTCCTATCCATTAAGTAAAACTAAGAAAAGG
AAAATCACAAGTACAAACTATATTGAAAAGCCAGCAGCAGAGCAATATGCAGGTAATTAC
AGCACTATTATGAATACCGAGAAAAAGAGTTCTGCCAAAAATAGGCATGAGTTCCCAAAG
GCTGCTCATTATTCCATTTTTTAAAGCACAAATTGACAATAATCAAACAGCAAATGTGTA
CACATCTATATAAAGTTTAAAAAAAAAAACTGATGGTGACAACTTAGTTTTTTGACTTTT
CCTATTACTGCTCAAATATCCTGCGGACTTTATTTAAAGACATTTGCAATTTGACTATAA
AGAAACATTTTTAAGAGGACCCATAGTTACAAATATAGCCCCATTTGGCAGAGTAATAAA
GCAACATAATGAGTGGCTGAGGCAAAACATACACAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCAGGAATTCGAATTCCAATTACTTATAATTTATCTCTAATTTAGGGAATTTCTTAAT
TTAAAAAATCTGAACAGTGTTCACAAGTTGGTGGTAATATTCTCACAATATGGAATCAAA
ATGTTATCCTCTCATGCCACATTTAAAATTTCCTATCCATTAAGTAAAACTAAGAAAAGG
AAAATCACAAGTACAAACTATATTGAAAAGCCAGCAGCAGAGCAATATGCAGGTAATTAC
AGCACTATTATGAATACCGAGAAAAAGAGTTCTGCCAAAAATAGGCATGAGTTCCCAAAG
GCTGCTCATTATTCCATTTTTTAAAGCACAAATTGACAATAATCAAACAGCAAATGTGTA
CACATCTATATAAAGTTTAAAAAAAAAAACTGATGGTGACAACTTAGTTTTTTGACTTTT
CCTATTACTGCTCAAATATCCTGCGGACTTTATTTAAAGACATTTGCAATTTGACTATAA
AGAAACATTTTTAAGAGGACCCATAGTTACAAATATAGCCCCATTTGGCAGAGTAATAAA
GCAACATAATGAGTGGCTGAGGCAAAACATACACAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               124-576, gnl|bosTau2|chr2 (6794439-6793985)
               

               
               124-576, gnl|Hg17|chr5 (109092538-109092095)
               

               
               124-576, gnl|Mm7|chr17 (62845631-62845209)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               124-576, gnl|bosTau2|chr2 (6794439-6793985)
               

               
               124-576, gnl|Hg17|chr5 (109092538-109092095)
               

               
               124-576, gnl|Mm7|chr17 (62845631-62845209)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.612276)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.612276)

	124-576, gnl\|bosTau2\|chr2 (6794439-6793985)
	124-576, gnl\|Hg17\|chr5 (109092538-109092095)
	124-576, gnl\|Mm7\|chr17 (62845631-62845209)