Non-Coding RNA Search

Ss1.1-rpigcf0_020377.5

Sequence:


               
               ATTCGAATTCGGATATTGTTACCAATGTTGGTGAGTTCTATAGAGCCACGTTCAGAGTGC
CACGTGCGAGCCTAAGAGTGAGACCAACCTGGCTGGATGAACAAAGAATCAGCAATGGCT
AAGAATCCCTGAGCTGCCCACTCAGTAACTAAAGGACTGATGTCTCTCTGCAGGAGGTGT
GTTTTTGGGTTTCCATGAGTGGCGCTGGGTCGCTTGGCTGTCTTGAGGACCGTCATAAGG
CAGTAGGTCTCGGTAGCCTTGGGGAGAGTTTGTGTCCAGGGAGAGCATGGGCGTTCCTTC
TGAGTCATCAGCTCACTGAGTTTTGACATTGACTTATGGGTCTGCAATGGATGTGGTGCA
ATATTTTTCTCATAGGACACTCTTCTCAGTCTGCCTTGTTGGGTCAAGGAGTAAACAATA
CCATTGTGACATGTTGTTTTCATGCTTTTACTTGTGAATGGTAGTCTCGCCACCGTATTC
AGAGATCTGAATAGAAACGTGACCCGAGGTCCCCCTCTGCAATTTCATGCCTTCAAATGC
TCATGTACACTGGCTTTGGAAAGGGAATTCCTCAGAGAAGCAGTCAATGCTCCCAGGTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTCGAATTCGGATATTGTTACCAATGTTGGTGAGTTCTATAGAGCCACGTTCAGAGTGC
CACGTGCGAGCCTAAGAGTGAGACCAACCTGGCTGGATGAACAAAGAATCAGCAATGGCT
AAGAATCCCTGAGCTGCCCACTCAGTAACTAAAGGACTGATGTCTCTCTGCAGGAGGTGT
GTTTTTGGGTTTCCATGAGTGGCGCTGGGTCGCTTGGCTGTCTTGAGGACCGTCATAAGG
CAGTAGGTCTCGGTAGCCTTGGGGAGAGTTTGTGTCCAGGGAGAGCATGGGCGTTCCTTC
TGAGTCATCAGCTCACTGAGTTTTGACATTGACTTATGGGTCTGCAATGGATGTGGTGCA
ATATTTTTCTCATAGGACACTCTTCTCAGTCTGCCTTGTTGGGTCAAGGAGTAAACAATA
CCATTGTGACATGTTGTTTTCATGCTTTTACTTGTGAATGGTAGTCTCGCCACCGTATTC
AGAGATCTGAATAGAAACGTGACCCGAGGTCCCCCTCTGCAATTTCATGCCTTCAAATGC
TCATGTACACTGGCTTTGGAAAGGGAATTCCTCAGAGAAGCAGTCAATGCTCCCAGGTAT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               59-600, gnl|bosTau2|chr25 (15299171-15298600)
               

               
               59-600, gnl|Hg17|chr16 (13998072-13998632)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               59-600, gnl|bosTau2|chr25 (15299171-15298600)
               

               
               59-600, gnl|Hg17|chr16 (13998072-13998632)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.459207)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.459207)

	59-600, gnl\|bosTau2\|chr25 (15299171-15298600)
	59-600, gnl\|Hg17\|chr16 (13998072-13998632)