Ss1.1-rpigcf0_020622.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGAAGCCAGCCCCCTTCCTGACTTCTGCTTTCTGCCCAGGATTGGCAGCAGTGGCAGCAA TTAATGCTGCCATCCAAAAGGGAGTTGCCGAGAAGACTGTTCTGGAACTAATGAATCCCG AAGCCCAGCTGCCCCAGGTGTACCCGTTTGCTGCCGAGCTTTATCAGAAGGAGCTGGCTA CCCTGCAGCAACAGAGTCCTGAGGTAAGTTAACTGGATCTGTGTGGTTTGTGAGCAAAGT GGGGTAGACCTGACTTTAATACCTATTTCTTGGCAGAGTTAGGTAGAACTTTTATTTATT GATTTTTTTTTTTTTTTTAACCACAAACTTAGACTCCTTATGGCTTTATTAAACTTGTGA TCTCCCTTGGTATTCCAGAATGCCTTTCCTTACGCTTTCCCCCACCGCCTTCCTTTCTGT GCAGCATAGCCTTCACCCATCCCGAGCTCTCTGTTGCGGTGGAGATGTTGGAATTCGAAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGAAGCCAGCCCCCTTCCTGACTTCTGCTTTCTGCCCAGGATTGGCAGCAGTGGCAGCAA TTAATGCTGCCATCCAAAAGGGAGTTGCCGAGAAGACTGTTCTGGAACTAATGAATCCCG AAGCCCAGCTGCCCCAGGTGTACCCGTTTGCTGCCGAGCTTTATCAGAAGGAGCTGGCTA CCCTGCAGCAACAGAGTCCTGAGGTAAGTTAACTGGATCTGTGTGGTTTGTGAGCAAAGT GGGGTAGACCTGACTTTAATACCTATTTCTTGGCAGAGTTAGGTAGAACTTTTATTTATT GATTTTTTTTTTTTTTTTAACCACAAACTTAGACTCCTTATGGCTTTATTAAACTTGTGA TCTCCCTTGGTATTCCAGAATGCCTTTCCTTACGCTTTCCCCCACCGCCTTCCTTTCTGT GCAGCATAGCCTTCACCCATCCCGAGCTCTCTGTTGCGGTGGAGATGTTGGAATTCGAAT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 42-241, - strand, RNAz p=0.828614 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 42-241, - strand, RNAz p=0.828614 |
| Predicted microRNA(s): 1 entry(ies) | More info |
| Predicted microRNA(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 105-256, - strand, RNAmicro p=0.989038 |
| Aligned organism(s): 5 entry(ies) | More info |
| Aligned organism(s): 5 entry(ies) | Help | Less info |
| 4-297, gnl|bosTau2|chr21 (12545290-12544995) | |
| 4-297, gnl|Hg17|chr15 (88796975-88797267) | |
| 4-297, gnl|Mm7|chr7 (76623801-76623543) | |
| 310-470, gnl|bosTau2|chr21 (12545001-12544844) | |
| 310-470, gnl|Hg17|chr15 (88797262-88797412) |
| Aligned organism(s): 5 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 4-297, gnl|bosTau2|chr21 (12545290-12544995) | |
| 4-297, gnl|Hg17|chr15 (88796975-88797267) | |
| 4-297, gnl|Mm7|chr7 (76623801-76623543) | |
| 310-470, gnl|bosTau2|chr21 (12545001-12544844) | |
| 310-470, gnl|Hg17|chr15 (88797262-88797412) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ctl (0.459207) |