Non-Coding RNA Search

Ss1.1-rpigcf0_020688.5

Sequence:


               
               ATTGTTTTTTTTTATATTTCTTTTTTTAATCTAGAGTCACTGGAAATTATCCTTGGTAGC
CCTGATACACTGGTAACTTGTATTTGGAAATTAATATATATTTTCCATACTTTTTATAGT
AGGAATAATTTTTTTAGTGCTGTATCAGGGTTAAAGAAATTAAATGTTCAGCAGACACAT
TTCACTTAAATATACTGTATTGAACATGGGTTACAAAAACTTCATTTTTATTTGCTGTCA
GAATTCACTCCTATTTCTTTTAAGATTGTTTTACTTTCAAAATTCTTCTGCAAAATCTTT
CAATAGTGATATTTTGAAATTTCTATTCTGGGAAAATTACATGGTAAATTACCCCAGTAA
ACCACATTAGTATTCATAGCCATGCGTATTTTATCGTATTATTTGAAGACGTAGTTATAA
ATCCATCTTAATCAATTAGTGCACTTATGTCAGAATAACTAGTTGGTTTTTTCCTTAAAA
TTCAAGGTCATCTGGTATTTTGTTCTTAGTGATAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTGTTTTTTTTTATATTTCTTTTTTTAATCTAGAGTCACTGGAAATTATCCTTGGTAGC
CCTGATACACTGGTAACTTGTATTTGGAAATTAATATATATTTTCCATACTTTTTATAGT
AGGAATAATTTTTTTAGTGCTGTATCAGGGTTAAAGAAATTAAATGTTCAGCAGACACAT
TTCACTTAAATATACTGTATTGAACATGGGTTACAAAAACTTCATTTTTATTTGCTGTCA
GAATTCACTCCTATTTCTTTTAAGATTGTTTTACTTTCAAAATTCTTCTGCAAAATCTTT
CAATAGTGATATTTTGAAATTTCTATTCTGGGAAAATTACATGGTAAATTACCCCAGTAA
ACCACATTAGTATTCATAGCCATGCGTATTTTATCGTATTATTTGAAGACGTAGTTATAA
ATCCATCTTAATCAATTAGTGCACTTATGTCAGAATAACTAGTTGGTTTTTTCCTTAAAA
TTCAAGGTCATCTGGTATTTTGTTCTTAGTGATAGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               11-506, gnl|bosTau2|chr9 (29317412-29316933)
               

               
               11-506, gnl|Hg17|chr6 (97095926-97096380)
               

               
               11-506, gnl|Mm7|chr4 (25330876-25330397)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-506, gnl|bosTau2|chr9 (29317412-29316933)
               

               
               11-506, gnl|Hg17|chr6 (97095926-97096380)
               

               
               11-506, gnl|Mm7|chr4 (25330876-25330397)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.765345)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.765345)

	11-506, gnl\|bosTau2\|chr9 (29317412-29316933)
	11-506, gnl\|Hg17\|chr6 (97095926-97096380)
	11-506, gnl\|Mm7\|chr4 (25330876-25330397)