Non-Coding RNA Search

Ss1.1-rpigcf0_021506.5

Sequence:


               
               AATCGAATTCCATGTATGTGTCCTCCTTCCTGGGAACTCTGGCTGGGATTTCCCCCTTTT
TTCTTACTGAAATAAAGACTAAGCCTCTGAATTAAGCCTCTGAAAGCCTCTTTTCAGGAC
ACAATAGTATTGATGGAGGGCAGAGCCTGAGACGAGTTCAAGGGATAGTTTCTAGACAAC
TCTGACGCATTTCCTTCAAAAAGACTCGCAAAATTTCACCAAGTCGTCTTGTCTTATCAG
CAAAGGCTATCAGCTCTGATTCCCGTTTTCACTTAAGCATCAACCCCTGTACACAAGCTC
ATCTTACCAGCATTTAGCAAATTGCTGTATCCCTGGAGGTCATCTTTCTTTCATCATTTT
AGCATATTTAAAAAAATTTGTGAGCATGGAGTGGAACAGAGGATATGGTTGGGGTATTAG
GGATGGGGGGGCAGCATCTTTTTTTTTCATTTAGATTTAATGGCTTTCGTTAATAAATTC
CAATACCCCTTGAGTTCAAGAATAAAGAGACATTTAGTCTCCTGTGCAATATAAGTCTGC
TGGATAAGTATAGGCTTTATGATCAATAATAACCAGGTACTTACGGGAACTCACAGATAC
GGTGGTTCCTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATCGAATTCCATGTATGTGTCCTCCTTCCTGGGAACTCTGGCTGGGATTTCCCCCTTTT
TTCTTACTGAAATAAAGACTAAGCCTCTGAATTAAGCCTCTGAAAGCCTCTTTTCAGGAC
ACAATAGTATTGATGGAGGGCAGAGCCTGAGACGAGTTCAAGGGATAGTTTCTAGACAAC
TCTGACGCATTTCCTTCAAAAAGACTCGCAAAATTTCACCAAGTCGTCTTGTCTTATCAG
CAAAGGCTATCAGCTCTGATTCCCGTTTTCACTTAAGCATCAACCCCTGTACACAAGCTC
ATCTTACCAGCATTTAGCAAATTGCTGTATCCCTGGAGGTCATCTTTCTTTCATCATTTT
AGCATATTTAAAAAAATTTGTGAGCATGGAGTGGAACAGAGGATATGGTTGGGGTATTAG
GGATGGGGGGGCAGCATCTTTTTTTTTCATTTAGATTTAATGGCTTTCGTTAATAAATTC
CAATACCCCTTGAGTTCAAGAATAAAGAGACATTTAGTCTCCTGTGCAATATAAGTCTGC
TGGATAAGTATAGGCTTTATGATCAATAATAACCAGGTACTTACGGGAACTCACAGATAC
GGTGGTTCCTTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               13-510, gnl|bosTau2|chr10 (14484985-14485486)
               

               
               13-510, gnl|Hg17|chr14 (22069052-22068556)
               

               
               13-510, gnl|Mm7|chr14 (49075028-49074538)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-510, gnl|bosTau2|chr10 (14484985-14485486)
               

               
               13-510, gnl|Hg17|chr14 (22069052-22068556)
               

               
               13-510, gnl|Mm7|chr14 (49075028-49074538)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ctl (1.37762)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (1.37762)

	13-510, gnl\|bosTau2\|chr10 (14484985-14485486)
	13-510, gnl\|Hg17\|chr14 (22069052-22068556)
	13-510, gnl\|Mm7\|chr14 (49075028-49074538)