Non-Coding RNA Search

Ss1.1-rpigcf0_021539.5

Sequence:


               
               ATTCCTCTATCATCTAGCTATGGCTCGATAGTGGTAGAGAGCTTTATAATTACAATGTGT
TAAAAGAAAAAAATTCAGGAGTTCCCATTGTGGCGTAGTGGAAACAAATCCAACCAGGAA
CCTTAAGGTCACGGGTTCCGTCCCAGGCCTCGCTCAGTGGGTTAAGGATCCGGCATTGCT
GTGAGCTGTGCTGTAGGTCACAGATGCGGCTTGGATACTGCGTGGCTGTGACTCTGGCAT
AGGCCGGTGGCTACGGCTCCGATTAGACCCCTAGCCTGGGAACCTCCATATGCCAAGGGT
GCGGCCCTAAAAAAAAAGCAAAACCAAAATTCAACTGAGTAAATGTTAAAAATCTTACTG
GCTTTATTCAGGGATCCATGAATCAGGCAGCATCCCATCCAGCAGATAGAAAGGAGCTCC
CAGGAGCTGCACAAAATAAAAGACTTACTGGCAGAAGAAATGGGGCAAGGAAAAAGCAGA
TTGGTCGTAGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTCCTCTATCATCTAGCTATGGCTCGATAGTGGTAGAGAGCTTTATAATTACAATGTGT
TAAAAGAAAAAAATTCAGGAGTTCCCATTGTGGCGTAGTGGAAACAAATCCAACCAGGAA
CCTTAAGGTCACGGGTTCCGTCCCAGGCCTCGCTCAGTGGGTTAAGGATCCGGCATTGCT
GTGAGCTGTGCTGTAGGTCACAGATGCGGCTTGGATACTGCGTGGCTGTGACTCTGGCAT
AGGCCGGTGGCTACGGCTCCGATTAGACCCCTAGCCTGGGAACCTCCATATGCCAAGGGT
GCGGCCCTAAAAAAAAAGCAAAACCAAAATTCAACTGAGTAAATGTTAAAAATCTTACTG
GCTTTATTCAGGGATCCATGAATCAGGCAGCATCCCATCCAGCAGATAGAAAGGAGCTCC
CAGGAGCTGCACAAAATAAAAGACTTACTGGCAGAAGAAATGGGGCAAGGAAAAAGCAGA
TTGGTCGTAGCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               319-479, gnl|bosTau2|chr3 (58546679-58546521)
               

               
               319-479, gnl|Mm7|chr12 (33001723-33001876)
               


               
               326-472, gnl|bosTau2|chr25 (23814718-23814864)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               319-479, gnl|bosTau2|chr3 (58546679-58546521)
               

               
               319-479, gnl|Mm7|chr12 (33001723-33001876)
               


               
               326-472, gnl|bosTau2|chr25 (23814718-23814864)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.306138)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.306138)

	319-479, gnl\|bosTau2\|chr3 (58546679-58546521)
	319-479, gnl\|Mm7\|chr12 (33001723-33001876)

	326-472, gnl\|bosTau2\|chr25 (23814718-23814864)