Non-Coding RNA Search

Ss1.1-rpigcf0_021551.5

Sequence:


               
               TTGGACCCAGCTCACTAAAAATACCCTAGACTCCCTGTTTGATCACTCTCCCTTTTGACC
TGCATGGATCGCGGCCCCGAGGCCCGCCCCACCCTCTGCCCGTTGTCCTTTAAAGGAGAA
GGGCGTGGGGACGGATTCCTGCCGCTCTGGGACAGATGTGCGCCGCCCGGGCAGGCTGGG
GCCGCGGCCGCACTGACGTCAGGGAAGCGCACACTCGGCAGTAGTCTCCCGGCTGGGTCC
AGGCCACCCGAAGGGAGGGGGAGCCGCGCGCTGGGATTGGCTGACCAAGAGCGAGCGCCC
GCACGGATTGGCTGGCGAAGTTTTAGAGGGAGTCCCGCTCTCCAATTAAAGGGCCCCGCC
ACGCCAGACTGCTCGCAGAGCTCCCGCTGGGCCCGCGATCCTGGCCATTCAGCCACCGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGGACCCAGCTCACTAAAAATACCCTAGACTCCCTGTTTGATCACTCTCCCTTTTGACC
TGCATGGATCGCGGCCCCGAGGCCCGCCCCACCCTCTGCCCGTTGTCCTTTAAAGGAGAA
GGGCGTGGGGACGGATTCCTGCCGCTCTGGGACAGATGTGCGCCGCCCGGGCAGGCTGGG
GCCGCGGCCGCACTGACGTCAGGGAAGCGCACACTCGGCAGTAGTCTCCCGGCTGGGTCC
AGGCCACCCGAAGGGAGGGGGAGCCGCGCGCTGGGATTGGCTGACCAAGAGCGAGCGCCC
GCACGGATTGGCTGGCGAAGTTTTAGAGGGAGTCCCGCTCTCCAATTAAAGGGCCCCGCC
ACGCCAGACTGCTCGCAGAGCTCCCGCTGGGCCCGCGATCCTGGCCATTCAGCCACCGCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-420, gnl|bosTau2|chr22 (7817348-7817774)
               

               
               1-420, gnl|Hg17|chr3 (8518133-8518557)
               

               
               1-420, gnl|Mm7|chr6 (112433608-112434033)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-420, gnl|bosTau2|chr22 (7817348-7817774)
               

               
               1-420, gnl|Hg17|chr3 (8518133-8518557)
               

               
               1-420, gnl|Mm7|chr6 (112433608-112434033)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.918414)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.918414)

	1-420, gnl\|bosTau2\|chr22 (7817348-7817774)
	1-420, gnl\|Hg17\|chr3 (8518133-8518557)
	1-420, gnl\|Mm7\|chr6 (112433608-112434033)