Ss1.1-rplac_0731.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCGTCTTTCACCCGCTAGTCGATCCCAACTCTGGTGAACTGGATGTAAAGAGAGCATTTG CAAAATGGAGGCGGAACCATAATCACATCTGGCAAGTATTGATGTATGCAAGGAGAGTTT TCTACAAGATTGATACAGCAAACCCCCTAAACCCAGAGGCTGCAGTACTGTATGAAAAAG ATGTTCAGCTTTTTAAAAGTAAAGTGGTTGACAGTGTTAAGGTGTGCACTGCTCGCTTGT TTGACCAACCTAAAATAGAAGACCCCTATGCAATTAGCTTTTCTCCATGGAATCCTTCTG TACATGATGAAGCCAGAGAGAAGATGCTGACTCAGAAAAAGCCTGAAGAACAGCACAATA AAAGTGTTCACGTTGCTGGCTTGTCATGGGTGAAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCGTCTTTCACCCGCTAGTCGATCCCAACTCTGGTGAACTGGATGTAAAGAGAGCATTTG CAAAATGGAGGCGGAACCATAATCACATCTGGCAAGTATTGATGTATGCAAGGAGAGTTT TCTACAAGATTGATACAGCAAACCCCCTAAACCCAGAGGCTGCAGTACTGTATGAAAAAG ATGTTCAGCTTTTTAAAAGTAAAGTGGTTGACAGTGTTAAGGTGTGCACTGCTCGCTTGT TTGACCAACCTAAAATAGAAGACCCCTATGCAATTAGCTTTTCTCCATGGAATCCTTCTG TACATGATGAAGCCAGAGAGAAGATGCTGACTCAGAAAAAGCCTGAAGAACAGCACAATA AAAGTGTTCACGTTGCTGGCTTGTCATGGGTGAAGC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 3-374, gnl|bosTau2|chr20 (25653222-25653582) | |
| 3-374, gnl|Hg17|chr5 (24206672-24207042) | |
| 3-374, gnl|Mm7|chr8 (89718834-89717212) | |
| 170-277, gnl|bosTau2|chr18 (21161487-21161380) | |
| 170-277, gnl|canFam2|chr2 (65141790-65141715) | |
| 170-277, gnl|canFam2|chr2 (65141784-65141707) | |
| 170-277, gnl|danRer3|chr7 (25829707-25829632) | |
| 170-277, gnl|danRer3|chr7 (25829700-25829634) | |
| 170-277, gnl|dasNov1|scaffold_3119 (635-712) | |
| 170-277, gnl|dasNov1|scaffold_71932 (9315-9240) | |
| 170-277, gnl|echTel1|scaffold_151725 (1190-1121) | |
| 170-277, gnl|echTel1|scaffold_215151 (3447-3372) | |
| 170-277, gnl|fr1|chrUn (10500840-10500911) | |
| 170-277, gnl|fr1|chrUn (10500992-10501049) | |
| 170-277, gnl|galGal2|chr11 (4903694-4903619) | |
| 170-277, gnl|galGal2|chr11 (4904071-4904016) | |
| 170-277, gnl|hg17|chr11 (96019047-96019114) | |
| 170-277, gnl|hg17|chr16 (52085546-52085621) | |
| 170-277, gnl|Hg17|chr16 (52085658-52085551) | |
| 170-277, gnl|loxAfr1|scaffold_3652 (38406-38331) | |
| 170-277, gnl|loxAfr1|scaffold_3652 (38398-38323) | |
| 170-277, gnl|mm7|chr8 (89718381-89718456) | |
| 170-277, gnl|Mm7|chr8 (89718493-89718386) | |
| 170-277, gnl|mm7|chr9 (13064929-13064878) | |
| 170-277, gnl|monDom2|scaffold_35 (19163270-19163349) | |
| 170-277, gnl|monDom2|scaffold_35 (19163280-19163357) | |
| 170-277, gnl|oryCun1|scaffold_204392 (51979-51914) | |
| 170-277, gnl|oryCun1|scaffold_204392 (51979-51906) | |
| 170-277, gnl|panTro1|chr18 (46127194-46127269) | |
| 170-277, gnl|panTro1|chr9 (97946246-97946313) | |
| 170-277, gnl|rheMac2|chr14 (95205995-95206072) | |
| 170-277, gnl|rheMac2|chr20 (51739978-51740053) | |
| 170-277, gnl|rn3|chr19 (17048040-17047965) | |
| 170-277, gnl|rn3|chr8 (9882570-9882519) | |
| 170-277, gnl|tetNig1|chr5 (728735-728806) | |
| 170-277, gnl|xenTro1|scaffold_387 (1097427-1097502) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-374, gnl|bosTau2|chr20 (25653222-25653582) | |
| 3-374, gnl|Hg17|chr5 (24206672-24207042) | |
| 3-374, gnl|Mm7|chr8 (89718834-89717212) | |
| 170-277, gnl|bosTau2|chr18 (21161487-21161380) | |
| 170-277, gnl|canFam2|chr2 (65141790-65141715) | |
| 170-277, gnl|canFam2|chr2 (65141784-65141707) | |
| 170-277, gnl|danRer3|chr7 (25829707-25829632) | |
| 170-277, gnl|danRer3|chr7 (25829700-25829634) | |
| 170-277, gnl|dasNov1|scaffold_3119 (635-712) | |
| 170-277, gnl|dasNov1|scaffold_71932 (9315-9240) | |
| 170-277, gnl|echTel1|scaffold_151725 (1190-1121) | |
| 170-277, gnl|echTel1|scaffold_215151 (3447-3372) | |
| 170-277, gnl|fr1|chrUn (10500840-10500911) | |
| 170-277, gnl|fr1|chrUn (10500992-10501049) | |
| 170-277, gnl|galGal2|chr11 (4903694-4903619) | |
| 170-277, gnl|galGal2|chr11 (4904071-4904016) | |
| 170-277, gnl|hg17|chr11 (96019047-96019114) | |
| 170-277, gnl|hg17|chr16 (52085546-52085621) | |
| 170-277, gnl|Hg17|chr16 (52085658-52085551) | |
| 170-277, gnl|loxAfr1|scaffold_3652 (38406-38331) | |
| 170-277, gnl|loxAfr1|scaffold_3652 (38398-38323) | |
| 170-277, gnl|mm7|chr8 (89718381-89718456) | |
| 170-277, gnl|Mm7|chr8 (89718493-89718386) | |
| 170-277, gnl|mm7|chr9 (13064929-13064878) | |
| 170-277, gnl|monDom2|scaffold_35 (19163270-19163349) | |
| 170-277, gnl|monDom2|scaffold_35 (19163280-19163357) | |
| 170-277, gnl|oryCun1|scaffold_204392 (51979-51914) | |
| 170-277, gnl|oryCun1|scaffold_204392 (51979-51906) | |
| 170-277, gnl|panTro1|chr18 (46127194-46127269) | |
| 170-277, gnl|panTro1|chr9 (97946246-97946313) | |
| 170-277, gnl|rheMac2|chr14 (95205995-95206072) | |
| 170-277, gnl|rheMac2|chr20 (51739978-51740053) | |
| 170-277, gnl|rn3|chr19 (17048040-17047965) | |
| 170-277, gnl|rn3|chr8 (9882570-9882519) | |
| 170-277, gnl|tetNig1|chr5 (728735-728806) | |
| 170-277, gnl|xenTro1|scaffold_387 (1097427-1097502) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| lin (0.145603) | |
| nca (0.136874) | |
| ste (0.135208) | |
| pla (0.133672) | |
| jej (0.0989218) | |
| ldo (0.0970026) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lin (0.145603) | |
| nca (0.136874) | |
| ste (0.135208) | |
| pla (0.133672) | |
| jej (0.0989218) | |
| ldo (0.0970026) |