Non-Coding RNA Search

Ss1.1-rplac_12103.5

Sequence:


               
               GCTGGGGAGGGAAGGGAGAGGGACTGCGGGTGCGGGCGAGAACCCCCCAATCCTGCTCTA
GCTCTCAACATCCCCAGTCTGTTTTCTAGCGGAGTGGTGTGCCTGGGAGAGAAGCTATCG
CCGAGGAAGGCTCGGGCCAGGCGCGCGAGGAGGCGCCCCTGGGGTCGGGGTAGCTGGCTC
TAAGAAGGGGACACTCTGAAAGTGAGTCCAGCTCAGGGAAGAAACTGCGGCACCTCTGGC
GCTTCGGACTGAGAGGAAGTTGGGCGGGAGCAAACTTTCTTGGAAGGTAGAGGCCGAACT
CTTCCCGGGCAGCTAGGGGCCGCGTGCGGAGGGAGGAGCGGTCGGCGCGGCGGGAGGGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGGGGAGGGAAGGGAGAGGGACTGCGGGTGCGGGCGAGAACCCCCCAATCCTGCTCTA
GCTCTCAACATCCCCAGTCTGTTTTCTAGCGGAGTGGTGTGCCTGGGAGAGAAGCTATCG
CCGAGGAAGGCTCGGGCCAGGCGCGCGAGGAGGCGCCCCTGGGGTCGGGGTAGCTGGCTC
TAAGAAGGGGACACTCTGAAAGTGAGTCCAGCTCAGGGAAGAAACTGCGGCACCTCTGGC
GCTTCGGACTGAGAGGAAGTTGGGCGGGAGCAAACTTTCTTGGAAGGTAGAGGCCGAACT
CTTCCCGGGCAGCTAGGGGCCGCGTGCGGAGGGAGGAGCGGTCGGCGCGGCGGGAGGGCG

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

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               10-360, gnl|bosTau2|chr8 (21663700-21663341)
               

               
               10-360, gnl|hg17|chr2 (114015240-114015606)
               

               
               10-360, gnl|Hg17|chr9 (63837-63513)
               

               
               10-360, gnl|loxAfr1|scaffold_133242 (735-1092)
               

               
               10-360, gnl|mm7|chr19 (24562273-24561924)
               

               
               10-360, gnl|Mm7|chr19 (24562223-24561895)
               

               
               10-360, gnl|monDom2|scaffold_17 (21907064-21906623)
               

               
               10-360, gnl|panTro1|chr11 (51949834-51950201)
               

               
               10-360, gnl|rheMac2|chr15 (77139823-77140191)
               

               
               10-360, gnl|rn3|chr1 (228465420-228465078)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-360, gnl|bosTau2|chr8 (21663700-21663341)
               

               
               10-360, gnl|hg17|chr2 (114015240-114015606)
               

               
               10-360, gnl|Hg17|chr9 (63837-63513)
               

               
               10-360, gnl|loxAfr1|scaffold_133242 (735-1092)
               

               
               10-360, gnl|mm7|chr19 (24562273-24561924)
               

               
               10-360, gnl|Mm7|chr19 (24562223-24561895)
               

               
               10-360, gnl|monDom2|scaffold_17 (21907064-21906623)
               

               
               10-360, gnl|panTro1|chr11 (51949834-51950201)
               

               
               10-360, gnl|rheMac2|chr15 (77139823-77140191)
               

               
               10-360, gnl|rn3|chr1 (228465420-228465078)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               pla (0.267344)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.267344)

	10-360, gnl\|bosTau2\|chr8 (21663700-21663341)
	10-360, gnl\|hg17\|chr2 (114015240-114015606)
	10-360, gnl\|Hg17\|chr9 (63837-63513)
	10-360, gnl\|loxAfr1\|scaffold_133242 (735-1092)
	10-360, gnl\|mm7\|chr19 (24562273-24561924)
	10-360, gnl\|Mm7\|chr19 (24562223-24561895)
	10-360, gnl\|monDom2\|scaffold_17 (21907064-21906623)
	10-360, gnl\|panTro1\|chr11 (51949834-51950201)
	10-360, gnl\|rheMac2\|chr15 (77139823-77140191)
	10-360, gnl\|rn3\|chr1 (228465420-228465078)