Non-Coding RNA Search

Ss1.1-rplac_12377.5

Sequence:


               
               AGGACGAGCCCCGCCAGGGCGGCCAGCCCGAGGACCGCAGGCGCCAGATCATTATCAACG
TGGGCGGCATCAAGTACTCGCTGCCCTGGACCACGCTGGAGGAGTTCCCGCTGACGCGGC
TGGGCCAGCTCAAGGCCTGCACCAACTTCGACGACATCCTCAACGTGTGCGATGACTACG
ACGTCACCTGCAACGAGTTCTTCTTCGACCGCAACCCGGGGGCCTTCGGCACCATCCTGA
CCTTCCTGCGGGCGGGCAAGCTGCGGCTGCTGCGGGAGATGTGCGCCCTGTCCTTCCAGG
AGGAGCTGCTCTACTGGGGCATCGCCGAGGACCACCTGGACGGCTGCTGCAAGCGCCGCT
ACCTGCAGAAGATCGAGGAGTTCGCCGAGATGGTGGAGCGGGAGGACGAGGACGACCCGC
TGGACAGCGAGGACCGCGACAGCGAGGGCCCGGCCGAGGGCGAGGGCCGCCTGGGCCGCT
GCATGCGGAGGCTGCGCGACATGGTGGAGAGGCCGCACTCGGGGCTGCCCGGCAAGGTGT
TCGCCTGCCTGTCGGTGCTCTTCGTCACTGTCACCGCCGTCAACCTCTCCATCAGCACCT
TGCCCAGCCTGTGCTGGGCCTTTGCAGGCACTGGGGTCGAGAGTGAGTAACACACAAACT
GTGCCAGGCGATGACAATCTTCTGGGACAGGGGCCAGGCAGGGCTTTATTCTGTTGCTCT
CGGCTCGTCAGTCTTCTCTATCCGGGGCCTCTGGGCCGTGCTTGGCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGACGAGCCCCGCCAGGGCGGCCAGCCCGAGGACCGCAGGCGCCAGATCATTATCAACG
TGGGCGGCATCAAGTACTCGCTGCCCTGGACCACGCTGGAGGAGTTCCCGCTGACGCGGC
TGGGCCAGCTCAAGGCCTGCACCAACTTCGACGACATCCTCAACGTGTGCGATGACTACG
ACGTCACCTGCAACGAGTTCTTCTTCGACCGCAACCCGGGGGCCTTCGGCACCATCCTGA
CCTTCCTGCGGGCGGGCAAGCTGCGGCTGCTGCGGGAGATGTGCGCCCTGTCCTTCCAGG
AGGAGCTGCTCTACTGGGGCATCGCCGAGGACCACCTGGACGGCTGCTGCAAGCGCCGCT
ACCTGCAGAAGATCGAGGAGTTCGCCGAGATGGTGGAGCGGGAGGACGAGGACGACCCGC
TGGACAGCGAGGACCGCGACAGCGAGGGCCCGGCCGAGGGCGAGGGCCGCCTGGGCCGCT
GCATGCGGAGGCTGCGCGACATGGTGGAGAGGCCGCACTCGGGGCTGCCCGGCAAGGTGT
TCGCCTGCCTGTCGGTGCTCTTCGTCACTGTCACCGCCGTCAACCTCTCCATCAGCACCT
TGCCCAGCCTGTGCTGGGCCTTTGCAGGCACTGGGGTCGAGAGTGAGTAACACACAAACT
GTGCCAGGCGATGACAATCTTCTGGGACAGGGGCCAGGCAGGGCTTTATTCTGTTGCTCT
CGGCTCGTCAGTCTTCTCTATCCGGGGCCTCTGGGCCGTGCTTGGCTT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|13623519|gb|AAH06367.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|13623519|gb|AAH06367.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-611, gnl|bosTau2|chr13 (59038476-59039086)
               

               
               1-611, gnl|Hg17|chr20 (49060137-49059527)
               

               
               1-611, gnl|Mm7|chr2 (168061751-168061141)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-611, gnl|bosTau2|chr13 (59038476-59039086)
               

               
               1-611, gnl|Hg17|chr20 (49060137-49059527)
               

               
               1-611, gnl|Mm7|chr2 (168061751-168061141)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.267344)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.267344)

	1-611, gnl\|bosTau2\|chr13 (59038476-59039086)
	1-611, gnl\|Hg17\|chr20 (49060137-49059527)
	1-611, gnl\|Mm7\|chr2 (168061751-168061141)