Ss1.1-rplac_13119.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTCTGCAGCCGCCTGAAGGAGGGCGTGAGGATGAGTGGCGCCCGAGTACGCCACCCCGG AAATCTATCAGATCATGTTGGACTGTTGGCACAAAGACCCCAAAGAAAGGCCAAGATTTG TGGAACTTGTGGAAAAACTAGGCGACCTGCTGCAAGCCAATGTACAACAGGACGGCAAAG ACTACATCCCCCTCAACGCCATTCTGACGAGCAACAGCGGCTTCACGTACTCCACTCCCG CCTTCTCCGAGGACTTCTTCAAGGAAGATATTTCTGCTCCCAAGTTTAACTCAGCAAGTT CGGATAATGTCAGATACGTGAATGCTTTCAATCTCATCAGCCTGGAAAGAATCAAAACCT TTGAAGAACTTTCCCCAAACGCCACCACCTCCGTGCTTAACGACTACCAGATGGACAACG GCTCCCTGCTGGCCTGCCCCTTGCTGAAGCGCTTCACCTGGACGGAGAGCAAGCCCAAGG CCTCACTCAAGATTGACCTGAGAGTAACCAGCAAGAGTAAGGAGTCGGGGCTCTGTGACC TCAACAGACCCACTTTCTGCCACTCCAGCTGTGGGCACCTCAGCACGGGCCAGCGGAGAT TCACCTATGACCACTCGGAGCTGGAGAGGAAGCTCTCGTGCTGCTCCCCTCCCCCCGACT ACAACTCGGTGGTCCTGTACTCCAGCCCTCCCGTTTAAGCCGCCGCACAGCCCTTCCAGC ACCACGTGTGTATCGATTCCCCCAGAAAACGAGCTTTGCCAATATTATTCACATATAAAT GTACGCCCTCCCCTTTAACCCACG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTCTGCAGCCGCCTGAAGGAGGGCGTGAGGATGAGTGGCGCCCGAGTACGCCACCCCGG AAATCTATCAGATCATGTTGGACTGTTGGCACAAAGACCCCAAAGAAAGGCCAAGATTTG TGGAACTTGTGGAAAAACTAGGCGACCTGCTGCAAGCCAATGTACAACAGGACGGCAAAG ACTACATCCCCCTCAACGCCATTCTGACGAGCAACAGCGGCTTCACGTACTCCACTCCCG CCTTCTCCGAGGACTTCTTCAAGGAAGATATTTCTGCTCCCAAGTTTAACTCAGCAAGTT CGGATAATGTCAGATACGTGAATGCTTTCAATCTCATCAGCCTGGAAAGAATCAAAACCT TTGAAGAACTTTCCCCAAACGCCACCACCTCCGTGCTTAACGACTACCAGATGGACAACG GCTCCCTGCTGGCCTGCCCCTTGCTGAAGCGCTTCACCTGGACGGAGAGCAAGCCCAAGG CCTCACTCAAGATTGACCTGAGAGTAACCAGCAAGAGTAAGGAGTCGGGGCTCTGTGACC TCAACAGACCCACTTTCTGCCACTCCAGCTGTGGGCACCTCAGCACGGGCCAGCGGAGAT TCACCTATGACCACTCGGAGCTGGAGAGGAAGCTCTCGTGCTGCTCCCCTCCCCCCGACT ACAACTCGGTGGTCCTGTACTCCAGCCCTCCCGTTTAAGCCGCCGCACAGCCCTTCCAGC ACCACGTGTGTATCGATTCCCCCAGAAAACGAGCTTTGCCAATATTATTCACATATAAAT GTACGCCCTCCCCTTTAACCCACG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 168-316, gnl|bosTau2|chr12 (14944696-14944548) | |
| 168-316, gnl|canFam2|chr25 (14386802-14386712) | |
| 168-316, gnl|canFam2|chr25 (14386821-14386701) | |
| 168-316, gnl|dasNov1|scaffold_150 (92033-92123) | |
| 168-316, gnl|dasNov1|scaffold_150 (92014-92134) | |
| 168-316, gnl|echTel1|scaffold_309091 (80711-80786) | |
| 168-316, gnl|echTel1|scaffold_309091 (80692-80797) | |
| 168-316, gnl|galGal2|chr1 (167944930-167944831) | |
| 168-316, gnl|hg17|chr13 (27783712-27783832) | |
| 168-316, gnl|Hg17|chr13 (27783872-27783724) | |
| 168-316, gnl|hg17|chr3 (46159249-46159339) | |
| 168-316, gnl|loxAfr1|scaffold_24 (98148-98058) | |
| 168-316, gnl|loxAfr1|scaffold_24 (98167-98047) | |
| 168-316, gnl|mm7|chr5 (146465272-146465362) | |
| 168-316, gnl|mm7|chr5 (146465253-146465373) | |
| 168-316, gnl|Mm7|chr5 (146465413-146465265) | |
| 168-316, gnl|monDom2|scaffold_15 (37597472-37597562) | |
| 168-316, gnl|monDom2|scaffold_15 (37597448-37597573) | |
| 168-316, gnl|oryCun1|scaffold_198574 (48367-48457) | |
| 168-316, gnl|oryCun1|scaffold_198574 (48348-48468) | |
| 168-316, gnl|panTro1|chr14 (26965704-26965824) | |
| 168-316, gnl|panTro1|chr2 (47509538-47509626) | |
| 168-316, gnl|rheMac2|chr17 (7956561-7956681) | |
| 168-316, gnl|rheMac2|chr2 (90384530-90384440) | |
| 168-316, gnl|rn3|chr12 (8059027-8058937) | |
| 168-316, gnl|rn3|chr12 (8059045-8058926) | |
| 168-316, gnl|xenTro1|scaffold_248 (1105239-1105362) | |
| 499-796, gnl|bosTau2|chr12 (14933395-14933088) | |
| 499-796, gnl|Hg17|chr13 (27775503-27775200) | |
| 499-796, gnl|Mm7|chr5 (146458808-146458554) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 168-316, gnl|bosTau2|chr12 (14944696-14944548) | |
| 168-316, gnl|canFam2|chr25 (14386802-14386712) | |
| 168-316, gnl|canFam2|chr25 (14386821-14386701) | |
| 168-316, gnl|dasNov1|scaffold_150 (92033-92123) | |
| 168-316, gnl|dasNov1|scaffold_150 (92014-92134) | |
| 168-316, gnl|echTel1|scaffold_309091 (80711-80786) | |
| 168-316, gnl|echTel1|scaffold_309091 (80692-80797) | |
| 168-316, gnl|galGal2|chr1 (167944930-167944831) | |
| 168-316, gnl|hg17|chr13 (27783712-27783832) | |
| 168-316, gnl|Hg17|chr13 (27783872-27783724) | |
| 168-316, gnl|hg17|chr3 (46159249-46159339) | |
| 168-316, gnl|loxAfr1|scaffold_24 (98148-98058) | |
| 168-316, gnl|loxAfr1|scaffold_24 (98167-98047) | |
| 168-316, gnl|mm7|chr5 (146465272-146465362) | |
| 168-316, gnl|mm7|chr5 (146465253-146465373) | |
| 168-316, gnl|Mm7|chr5 (146465413-146465265) | |
| 168-316, gnl|monDom2|scaffold_15 (37597472-37597562) | |
| 168-316, gnl|monDom2|scaffold_15 (37597448-37597573) | |
| 168-316, gnl|oryCun1|scaffold_198574 (48367-48457) | |
| 168-316, gnl|oryCun1|scaffold_198574 (48348-48468) | |
| 168-316, gnl|panTro1|chr14 (26965704-26965824) | |
| 168-316, gnl|panTro1|chr2 (47509538-47509626) | |
| 168-316, gnl|rheMac2|chr17 (7956561-7956681) | |
| 168-316, gnl|rheMac2|chr2 (90384530-90384440) | |
| 168-316, gnl|rn3|chr12 (8059027-8058937) | |
| 168-316, gnl|rn3|chr12 (8059045-8058926) | |
| 168-316, gnl|xenTro1|scaffold_248 (1105239-1105362) | |
| 499-796, gnl|bosTau2|chr12 (14933395-14933088) | |
| 499-796, gnl|Hg17|chr13 (27775503-27775200) | |
| 499-796, gnl|Mm7|chr5 (146458808-146458554) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fbs (0.175346) | |
| pla (0.133672) |