Non-Coding RNA Search

Ss1.1-rplac_13124.5

Sequence:


               
               CATGTTCAAAGTGCTGAGGCATCATTAGCTCTAACAGCAGCAGCAGTGGAGGAGAAGGTC
TTAGGAGAAGCTATCAAGATTTTAGAAGCAGCTGAAACGCTGGAATCTGCAGGTGCACAT
TTCGTACCAGAAGAAAAATCCTCAGAAAAAGAGGAAGATGCTCCTGCTCAGCGGGGTGAA
GATGTGGTGCCTACAGGGACTGAGTCTCAGGCAGAATCAGTGCCGGTGATAGCAGCTGTT
ACTCCTGAAAAAGGCATCAGCGCCGACCTGGAAGGAGATAAAACCACATCACAGAAACGG
GAGTCAGATGCAGGCGAAGAGCAGGTTGATCTTTGGGAAGGCAGAGCGAGTGAAACAAGA
GAGGAAGATTTAAAGGCTGAAAATGAGATTTTGAAACTTGAGACTGAGAGCTGCAGACTC
GTGCAGAACGTAATTCAGACAGTTGTGGACCGGTTGGGAAGCACCGAAGACACGGCCACT
GATTTCCAGACCCAGGCTCCACTGACGAAAACTGACAGCCAGGAAGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATGTTCAAAGTGCTGAGGCATCATTAGCTCTAACAGCAGCAGCAGTGGAGGAGAAGGTC
TTAGGAGAAGCTATCAAGATTTTAGAAGCAGCTGAAACGCTGGAATCTGCAGGTGCACAT
TTCGTACCAGAAGAAAAATCCTCAGAAAAAGAGGAAGATGCTCCTGCTCAGCGGGGTGAA
GATGTGGTGCCTACAGGGACTGAGTCTCAGGCAGAATCAGTGCCGGTGATAGCAGCTGTT
ACTCCTGAAAAAGGCATCAGCGCCGACCTGGAAGGAGATAAAACCACATCACAGAAACGG
GAGTCAGATGCAGGCGAAGAGCAGGTTGATCTTTGGGAAGGCAGAGCGAGTGAAACAAGA
GAGGAAGATTTAAAGGCTGAAAATGAGATTTTGAAACTTGAGACTGAGAGCTGCAGACTC
GTGCAGAACGTAATTCAGACAGTTGTGGACCGGTTGGGAAGCACCGAAGACACGGCCACT
GATTTCCAGACCCAGGCTCCACTGACGAAAACTGACAGCCAGGAAGCA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               4-527, gnl|bosTau2|chr9 (52936916-52936390)
               

               
               4-527, gnl|Hg17|chr6 (151765874-151766409)
               

               
               4-527, gnl|Mm7|chr10 (5990190-5989655)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-527, gnl|bosTau2|chr9 (52936916-52936390)
               

               
               4-527, gnl|Hg17|chr6 (151765874-151766409)
               

               
               4-527, gnl|Mm7|chr10 (5990190-5989655)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pla (0.267344)
               

               
               clu (0.119646)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.267344)
               

               
               clu (0.119646)

	4-527, gnl\|bosTau2\|chr9 (52936916-52936390)
	4-527, gnl\|Hg17\|chr6 (151765874-151766409)
	4-527, gnl\|Mm7\|chr10 (5990190-5989655)