Ss1.1-rplac_13649.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGGGACGAGCAGCGGCTCTACGAGCTCATCGTGCGCCACTTCCTGGCCTGCTGCTCCCG GGACGCGCAGGGCCAGGAGACCACCGTGGAGATAGACATCGCGCAGGAGCGCTTCGTGGC CCACGGCCTGGTGATTCTGGCCCGGAACTACCTGGACGTGTACCCCTACGACCACTGGAG CGACAAGGTCCTCCCCGGCTACGAGCGAGGCTCCCGCTTTCAGCCCAGCACCGTGGAGAT GGTGGACGGGGAGACCAGCCCGCCGCAGCTGCTCACCGAGGCCGACCTCATCGCCCTCAT GGAGAAGCACGGCATCGGTCAGTGGCTTGTCAGCATGGGGCCTGGCGGCTCTGGCGCCTT CCCCGCAGCCGTGACGCGGGCGCTGGGTTCAACCCCCGCCCCGGAGCTGCAGGGAGGCTT GGAGCAGTTGGGAGCTCGGGCAGGGTGCAGAGCCTGTGAGAGGAAAAGCACGGTCCAGGT CGCCCGGTCCTTCCTGCCCCGAGCCACTGCCCTGCGGCGTCCCCGCGTGGGCTTGTGCCT CCTGCCCCTCGGGGTCTCAGCGGGGCCGCCCTGCCCAGGTCCTGTCCAGAGAACGCGGTA TTTCGGGCCCACACGGGATGTGCTGTTCGTCGTGTTCTCAGGAGAGTCTCGACATTGTAC ATGGCAGGGGTTCACACACCCTTTGCAGCACCAGGGCGCCTGGCGGCCAGAGCCCTCGCT CCCCGGGCACAGCGGCTGGGCTTTGAGGGCGGCCCGTCTCTGTCGCTCACGCCTGCCTCG CTCACCTCTCGGCACATGCCAGGCCCTGTGGAGTCTGCTTCCTGCTCTTCACCCTGGGCG GCTACGCACCCTTGTCGAAGCATTTCCCTGATGGGTTACGAGTCAGAAGTTGGGGTTGAG GAGTTTCTGCTGGGGCGCAGGGGTCATGAATCCGACTTGACTGCAGGGGCTCAGGTTGCT GCGGAGATGCAGTCTCTCACCTGAGAGCTTCTGTGCTTTGGGTGTGGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGGGACGAGCAGCGGCTCTACGAGCTCATCGTGCGCCACTTCCTGGCCTGCTGCTCCCG GGACGCGCAGGGCCAGGAGACCACCGTGGAGATAGACATCGCGCAGGAGCGCTTCGTGGC CCACGGCCTGGTGATTCTGGCCCGGAACTACCTGGACGTGTACCCCTACGACCACTGGAG CGACAAGGTCCTCCCCGGCTACGAGCGAGGCTCCCGCTTTCAGCCCAGCACCGTGGAGAT GGTGGACGGGGAGACCAGCCCGCCGCAGCTGCTCACCGAGGCCGACCTCATCGCCCTCAT GGAGAAGCACGGCATCGGTCAGTGGCTTGTCAGCATGGGGCCTGGCGGCTCTGGCGCCTT CCCCGCAGCCGTGACGCGGGCGCTGGGTTCAACCCCCGCCCCGGAGCTGCAGGGAGGCTT GGAGCAGTTGGGAGCTCGGGCAGGGTGCAGAGCCTGTGAGAGGAAAAGCACGGTCCAGGT CGCCCGGTCCTTCCTGCCCCGAGCCACTGCCCTGCGGCGTCCCCGCGTGGGCTTGTGCCT CCTGCCCCTCGGGGTCTCAGCGGGGCCGCCCTGCCCAGGTCCTGTCCAGAGAACGCGGTA TTTCGGGCCCACACGGGATGTGCTGTTCGTCGTGTTCTCAGGAGAGTCTCGACATTGTAC ATGGCAGGGGTTCACACACCCTTTGCAGCACCAGGGCGCCTGGCGGCCAGAGCCCTCGCT CCCCGGGCACAGCGGCTGGGCTTTGAGGGCGGCCCGTCTCTGTCGCTCACGCCTGCCTCG CTCACCTCTCGGCACATGCCAGGCCCTGTGGAGTCTGCTTCCTGCTCTTCACCCTGGGCG GCTACGCACCCTTGTCGAAGCATTTCCCTGATGGGTTACGAGTCAGAAGTTGGGGTTGAG GAGTTTCTGCTGGGGCGCAGGGGTCATGAATCCGACTTGACTGCAGGGGCTCAGGTTGCT GCGGAGATGCAGTCTCTCACCTGAGAGCTTCTGTGCTTTGGGTGTGGC |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-189, gnl|bosTau2|chr19 (26639645-26639457) | |
| 1-189, gnl|canFam2|chr5 (44278487-44278273) | |
| 1-189, gnl|danRer3|chr3 (37628724-37628534) | |
| 1-189, gnl|dasNov1|scaffold_22162 (9290-9076) | |
| 1-189, gnl|echTel1|scaffold_287489 (8206-8418) | |
| 1-189, gnl|fr1|chrUn (182863397-182863193) | |
| 1-189, gnl|galGal2|chr14 (7140768-7140987) | |
| 1-189, gnl|hg17|chr17 (18134876-18135088) | |
| 1-189, gnl|Hg17|chr17 (18135067-18134879) | |
| 1-189, gnl|mm7|chr11 (60830957-60831167) | |
| 1-189, gnl|Mm7|chr11 (60831148-60830960) | |
| 1-189, gnl|monDom2|scaffold_55 (12078508-12078302) | |
| 1-189, gnl|oryCun1|scaffold_212504 (50017-49807) | |
| 1-189, gnl|panTro1|chr19 (18542298-18542510) | |
| 1-189, gnl|rheMac2|chr16 (18215244-18215456) | |
| 1-189, gnl|rn3|chr10 (46909501-46909711) | |
| 1-189, gnl|tetNig1|chrUn_random (38792681-38792873) | |
| 1-189, gnl|xenTro1|scaffold_142 (1086381-1086172) | |
| 190-345, gnl|bosTau2|chr19 (26639376-26639221) | |
| 190-345, gnl|Hg17|chr17 (18134723-18134571) | |
| 190-345, gnl|Mm7|chr11 (60830851-60830714) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-189, gnl|bosTau2|chr19 (26639645-26639457) | |
| 1-189, gnl|canFam2|chr5 (44278487-44278273) | |
| 1-189, gnl|danRer3|chr3 (37628724-37628534) | |
| 1-189, gnl|dasNov1|scaffold_22162 (9290-9076) | |
| 1-189, gnl|echTel1|scaffold_287489 (8206-8418) | |
| 1-189, gnl|fr1|chrUn (182863397-182863193) | |
| 1-189, gnl|galGal2|chr14 (7140768-7140987) | |
| 1-189, gnl|hg17|chr17 (18134876-18135088) | |
| 1-189, gnl|Hg17|chr17 (18135067-18134879) | |
| 1-189, gnl|mm7|chr11 (60830957-60831167) | |
| 1-189, gnl|Mm7|chr11 (60831148-60830960) | |
| 1-189, gnl|monDom2|scaffold_55 (12078508-12078302) | |
| 1-189, gnl|oryCun1|scaffold_212504 (50017-49807) | |
| 1-189, gnl|panTro1|chr19 (18542298-18542510) | |
| 1-189, gnl|rheMac2|chr16 (18215244-18215456) | |
| 1-189, gnl|rn3|chr10 (46909501-46909711) | |
| 1-189, gnl|tetNig1|chrUn_random (38792681-38792873) | |
| 1-189, gnl|xenTro1|scaffold_142 (1086381-1086172) | |
| 190-345, gnl|bosTau2|chr19 (26639376-26639221) | |
| 190-345, gnl|Hg17|chr17 (18134723-18134571) | |
| 190-345, gnl|Mm7|chr11 (60830851-60830714) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.267344) | |
| cly (0.120642) |