Non-Coding RNA Search

Ss1.1-rplac_14139.5

Sequence:


               
               GTCACGAGGGCGCTTCACTCGAAGTGTGAGCAGCACCTCAAAGAGGTGTGCCCCGTGTGT
TTCTATTTCAATCCAAGAAGGAACCTGGGGCCCCTTCCAGCTTTAAAGAGAAGCTGCTGC
TACCACAGTCCTTGTCTCTTTTAGGCAGTTTTCTCAATGCCACCACTCCCACACCTTGAC
TTCAGGGCTTGCAGTCTGGCAATGGTGGTTTAATTTTATTTACTTTCTCTTGATGGCTAA
AGCTGGGCAGCAGCTGTTTCAAGGCTGAGTTGTAAATCCTTTTCTTTGAAGGGGGAGGGA
AAACGAGAGAGAGCATACAAGCTTGTCTGTCTTCAATCTCTTCTTGTTATTCCCAAACCC
TTTAAGGGCTCCGTTTCCTATACAGTTCATGCAAAATGAAAGGAAAACATAAAATCCCTG
AAGCCATGTTCTTCCCAATGAGCACAATAAGATGAATAAATCAATTCCACTCGATGACAC
TTTTAAAAGGTTACTGTGGAAGAGGTCCCCGTTCCCAGGTGAGATAATGTCTCTGATCTT
CTTCAACCTTGGGATTTTTGGATGCAGAGTTCAACTGGATTACAGTGCCTCACCCCCGGC
GCTGTTCCCGTCACCGCTACCGTCGTAGTCGCCGCCGCCTCCCGGTAGTGCCGTCCGGCC
TCTGAGAGGCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCACGAGGGCGCTTCACTCGAAGTGTGAGCAGCACCTCAAAGAGGTGTGCCCCGTGTGT
TTCTATTTCAATCCAAGAAGGAACCTGGGGCCCCTTCCAGCTTTAAAGAGAAGCTGCTGC
TACCACAGTCCTTGTCTCTTTTAGGCAGTTTTCTCAATGCCACCACTCCCACACCTTGAC
TTCAGGGCTTGCAGTCTGGCAATGGTGGTTTAATTTTATTTACTTTCTCTTGATGGCTAA
AGCTGGGCAGCAGCTGTTTCAAGGCTGAGTTGTAAATCCTTTTCTTTGAAGGGGGAGGGA
AAACGAGAGAGAGCATACAAGCTTGTCTGTCTTCAATCTCTTCTTGTTATTCCCAAACCC
TTTAAGGGCTCCGTTTCCTATACAGTTCATGCAAAATGAAAGGAAAACATAAAATCCCTG
AAGCCATGTTCTTCCCAATGAGCACAATAAGATGAATAAATCAATTCCACTCGATGACAC
TTTTAAAAGGTTACTGTGGAAGAGGTCCCCGTTCCCAGGTGAGATAATGTCTCTGATCTT
CTTCAACCTTGGGATTTTTGGATGCAGAGTTCAACTGGATTACAGTGCCTCACCCCCGGC
GCTGTTCCCGTCACCGCTACCGTCGTAGTCGCCGCCGCCTCCCGGTAGTGCCGTCCGGCC
TCTGAGAGGCAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               20-594, gnl|bosTau2|chr15 (50476188-50476792)
               

               
               20-594, gnl|Hg17|chr11 (57196653-57196068)
               

               
               20-594, gnl|Mm7|chr2 (84554610-84555189)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               20-594, gnl|bosTau2|chr15 (50476188-50476792)
               

               
               20-594, gnl|Hg17|chr11 (57196653-57196068)
               

               
               20-594, gnl|Mm7|chr2 (84554610-84555189)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	20-594, gnl\|bosTau2\|chr15 (50476188-50476792)
	20-594, gnl\|Hg17\|chr11 (57196653-57196068)
	20-594, gnl\|Mm7\|chr2 (84554610-84555189)