Non-Coding RNA Search

Ss1.1-rplac_15118.5

Sequence:


               
               TCCTGGAGCGGAAGCCCCGCTGTCCTCTCGGAGGCTCCTCTCCTGCCCCGGAGCCCCCCG
CGGCCCTGTGCACAGGTGAGGCCGGCCCTAGAGCCCAGCCACCCTGAAACCACGACGTCT
CCATTCCTGAAGGGCGGTGGGAAGCGGCTGCCCGGGTGAACACTGGACAGAGTGGGGGCT
TGGAGCCAGGTGGGCAGAGAGAAGGTTCCGGATGGCCTTTACCTTCTCTGGCAGCGGTCC
TCTCGCGTGGAGCGTGGGTAGGTGACGGCAACACTCAGCTCCCAGGGGAGCTGTGACGGT
TCCTGCAGACAGAACCGAAGGCAGGCTCCGAGCAAGAAGGAAGGCGCAAAGCTGCCTGAC
TAGCACGGAGGGGCCGGCTCTGGAGAGAATGTCAGACGACAGGGCTTTGGCGAAAGAACT
GAATTTAAAATAGATATCCTCAGATTGAGAAAAATCCTTTACCTAGTTACTCATCTCATG
GTTAACTCAGGCCTGGCGTTAAACTGCCGAATATATGAATGAGACTCTAAGATTACTCGT
ACAAAATTATGTTGTGGCCTATACGTCCACGCAGGTGTGTGTACAGCAGCTTTTTCTCCC
CTGAAGGGTCAGTTGTGCCATCTGCCTTCCTTCCTTAACACGCTTCCCTGTCAGAAAGCA
GGCGCTTGTCTACACGGCCATGTTCAGCGGCTGCCCAGGTCTCCACTCTGCGGCCACACC
GCGGCATGCCTAACCAGCCCCGACACCGGGCATTTGATTCGGCGAGCAAATTTTCACTTT
TAAAATGAACACTGGGCCAGACATCTTTCCCTTACGAGACCCTGAACACTGCCGACGGAT
ATAAAAATGGACAATTTCACGACCCCCTCGCAAGCTCCTCAGGAAAGTGACTGTGACCTC
TACGCCCACCATGACACAGCCAGGATCCTCATGCCTCTGCATTACAGCATCGTCTTCATA
ATCGGGCTCATGGGAAACTTGTTGGCCCTGACTGTATTTATTCATAACAGGAAAAAAATA
AACTCTAACCACTCTATATTCAACCAAATTGGTGATTTCGAATATACTGGTTACCACTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCTGGAGCGGAAGCCCCGCTGTCCTCTCGGAGGCTCCTCTCCTGCCCCGGAGCCCCCCG
CGGCCCTGTGCACAGGTGAGGCCGGCCCTAGAGCCCAGCCACCCTGAAACCACGACGTCT
CCATTCCTGAAGGGCGGTGGGAAGCGGCTGCCCGGGTGAACACTGGACAGAGTGGGGGCT
TGGAGCCAGGTGGGCAGAGAGAAGGTTCCGGATGGCCTTTACCTTCTCTGGCAGCGGTCC
TCTCGCGTGGAGCGTGGGTAGGTGACGGCAACACTCAGCTCCCAGGGGAGCTGTGACGGT
TCCTGCAGACAGAACCGAAGGCAGGCTCCGAGCAAGAAGGAAGGCGCAAAGCTGCCTGAC
TAGCACGGAGGGGCCGGCTCTGGAGAGAATGTCAGACGACAGGGCTTTGGCGAAAGAACT
GAATTTAAAATAGATATCCTCAGATTGAGAAAAATCCTTTACCTAGTTACTCATCTCATG
GTTAACTCAGGCCTGGCGTTAAACTGCCGAATATATGAATGAGACTCTAAGATTACTCGT
ACAAAATTATGTTGTGGCCTATACGTCCACGCAGGTGTGTGTACAGCAGCTTTTTCTCCC
CTGAAGGGTCAGTTGTGCCATCTGCCTTCCTTCCTTAACACGCTTCCCTGTCAGAAAGCA
GGCGCTTGTCTACACGGCCATGTTCAGCGGCTGCCCAGGTCTCCACTCTGCGGCCACACC
GCGGCATGCCTAACCAGCCCCGACACCGGGCATTTGATTCGGCGAGCAAATTTTCACTTT
TAAAATGAACACTGGGCCAGACATCTTTCCCTTACGAGACCCTGAACACTGCCGACGGAT
ATAAAAATGGACAATTTCACGACCCCCTCGCAAGCTCCTCAGGAAAGTGACTGTGACCTC
TACGCCCACCATGACACAGCCAGGATCCTCATGCCTCTGCATTACAGCATCGTCTTCATA
ATCGGGCTCATGGGAAACTTGTTGGCCCTGACTGTATTTATTCATAACAGGAAAAAAATA
AACTCTAACCACTCTATATTCAACCAAATTGGTGATTTCGAATATACTGGTTACCACTGC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               66-817, gnl|bosTau2|chr12 (39905897-39905139)
               

               
               66-817, gnl|Hg17|chr13 (98750322-98749470)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               66-817, gnl|bosTau2|chr12 (39905897-39905139)
               

               
               66-817, gnl|Hg17|chr13 (98750322-98749470)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.267344)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.267344)

	66-817, gnl\|bosTau2\|chr12 (39905897-39905139)
	66-817, gnl\|Hg17\|chr13 (98750322-98749470)