Non-Coding RNA Search

Ss1.1-rplac_15612.5

Sequence:


               
               CGCGAGAAGTAGCAGCAGGACGGGCGGCGGCGGAGACGGCAGCCCTGAGATGCATTTTCC
TCTCCAGCGGCCATGTTAACCAGGAAACCTTCGGCCGCCGCTCCCGCCGCCTACCCGACC
GGCCGAGGAGGGGACAGCGCCGTTCGTCAGCTTCAGGCTTCCCCGGGGCTCGGTGCAGGG
GCCCCCCGGAGCGGAGTGGGGACCGGCCCGCCCTCCCCCATCGCCCTGCCGCCTCTCCGG
GCCAGCAACGCTGCCGCCGCAGCCCACACGATTGGCGGCAGTAAGCACACAATGAATGAT
CACCTACACGTCGGCAGCCACAGCCACGGACAGATCCAGGTTCAGCAGCTGTTTGAGGAT
AACAGCAACAAGCGGACAGTGCTCACGACACAACCAAATGGGCTTACAACAGTGGGCAAA
GGGGTTGCCCGTGTGCCGGAGCGGCAGCTGGAGAGCTTCACAGTGCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCGAGAAGTAGCAGCAGGACGGGCGGCGGCGGAGACGGCAGCCCTGAGATGCATTTTCC
TCTCCAGCGGCCATGTTAACCAGGAAACCTTCGGCCGCCGCTCCCGCCGCCTACCCGACC
GGCCGAGGAGGGGACAGCGCCGTTCGTCAGCTTCAGGCTTCCCCGGGGCTCGGTGCAGGG
GCCCCCCGGAGCGGAGTGGGGACCGGCCCGCCCTCCCCCATCGCCCTGCCGCCTCTCCGG
GCCAGCAACGCTGCCGCCGCAGCCCACACGATTGGCGGCAGTAAGCACACAATGAATGAT
CACCTACACGTCGGCAGCCACAGCCACGGACAGATCCAGGTTCAGCAGCTGTTTGAGGAT
AACAGCAACAAGCGGACAGTGCTCACGACACAACCAAATGGGCTTACAACAGTGGGCAAA
GGGGTTGCCCGTGTGCCGGAGCGGCAGCTGGAGAGCTTCACAGTGCAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               101-270, gnl|bosTau2|chr5 (30016476-30016644)
               

               
               101-270, gnl|Hg17|chr12 (66329824-66329992)
               

               
               101-270, gnl|Mm7|chr10 (118268164-118267996)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               101-270, gnl|bosTau2|chr5 (30016476-30016644)
               

               
               101-270, gnl|Hg17|chr12 (66329824-66329992)
               

               
               101-270, gnl|Mm7|chr10 (118268164-118267996)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.267344)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.267344)

	101-270, gnl\|bosTau2\|chr5 (30016476-30016644)
	101-270, gnl\|Hg17\|chr12 (66329824-66329992)
	101-270, gnl\|Mm7\|chr10 (118268164-118267996)