Ss1.1-rplac_1593.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGAGCCGCGTGTAAGGTACGGAGGCCGCGGAACGAGAGCTCGAAGGCGGCTTCCAGTGG CCGGGAGAGTGCGCCCGGGGGAAGCTGCCTTAGCGGGACGGAGTCAAGACGGTCGGCGGA GCACCGGGGGCTCGCGGGTCCAGATGCTCTGATCTTTGACCCCTGCCGGTCAGACCTAGG GCCCTGTGTAGGTCCGAGTCTTTCAAGCAGCCACACCATGAACACGTCTCCAGGCACGGT GGGCAGTGACCCTGTCATCTTGGCCACTGCAGGCTATGACCACACAGTGCGGTTCTGGCA GGCCCACAGCGGGATCTGTACCCGAACCGTACAGCACCAGGACTCCCAGGTGAACGCACT GGAGATCACACCCGACCGTAGCATGATTGCTGCTGCAGGTTACCAGCACATTCGCATGTA TGATCTCAACTCCAATAATCCCAACCCCATCATCAGCTACGATGGGGTCAACAAGAACAT CGCGTCTGTGGGCTTCCATGAGGATGGCCGCTGGATGTACACTGGTGGCGAGGACTGCAC GGCCCGGATCTGGGACCTCAGGTCCCGGAACCTGCAGTGTCAGCGGATCTTCCAGGTGAA CGCGCCCATTAACTGCGTGTGCTTGCACCCCAACCAGGCGGAGCTCATCGTGGGTGACCA GAGCGGCGCCATCCACATCTGGGACCTGAAAACTGACCACAACGAGCAGCTGATCCCGGA GCCCGAGGTCTCCATCACGTCTGCCCACATCGACCCCGACGCCAGCTACATGGCGGCAGT CAACAGCACTGGGAACTGCTTTGTCTGGAATCTGACCGGGGGCATTGGCGACGAGGTGAC ACAGCTCATCCCCAAGACCAAAATCCCAGCCCACAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGAGCCGCGTGTAAGGTACGGAGGCCGCGGAACGAGAGCTCGAAGGCGGCTTCCAGTGG CCGGGAGAGTGCGCCCGGGGGAAGCTGCCTTAGCGGGACGGAGTCAAGACGGTCGGCGGA GCACCGGGGGCTCGCGGGTCCAGATGCTCTGATCTTTGACCCCTGCCGGTCAGACCTAGG GCCCTGTGTAGGTCCGAGTCTTTCAAGCAGCCACACCATGAACACGTCTCCAGGCACGGT GGGCAGTGACCCTGTCATCTTGGCCACTGCAGGCTATGACCACACAGTGCGGTTCTGGCA GGCCCACAGCGGGATCTGTACCCGAACCGTACAGCACCAGGACTCCCAGGTGAACGCACT GGAGATCACACCCGACCGTAGCATGATTGCTGCTGCAGGTTACCAGCACATTCGCATGTA TGATCTCAACTCCAATAATCCCAACCCCATCATCAGCTACGATGGGGTCAACAAGAACAT CGCGTCTGTGGGCTTCCATGAGGATGGCCGCTGGATGTACACTGGTGGCGAGGACTGCAC GGCCCGGATCTGGGACCTCAGGTCCCGGAACCTGCAGTGTCAGCGGATCTTCCAGGTGAA CGCGCCCATTAACTGCGTGTGCTTGCACCCCAACCAGGCGGAGCTCATCGTGGGTGACCA GAGCGGCGCCATCCACATCTGGGACCTGAAAACTGACCACAACGAGCAGCTGATCCCGGA GCCCGAGGTCTCCATCACGTCTGCCCACATCGACCCCGACGCCAGCTACATGGCGGCAGT CAACAGCACTGGGAACTGCTTTGTCTGGAATCTGACCGGGGGCATTGGCGACGAGGTGAC ACAGCTCATCCCCAAGACCAAAATCCCAGCCCACAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 132-346, gnl|bosTau2|chr25 (5057627-5057413) | |
| 132-346, gnl|Hg17|chr16 (2196024-2196216) | |
| 132-346, gnl|Mm7|chr17 (22659362-22659145) | |
| 390-563, gnl|bosTau2|chr25 (5057163-5056989) | |
| 390-563, gnl|Hg17|chr16 (2196489-2196663) | |
| 390-563, gnl|Mm7|chr17 (22658860-22658686) | |
| 635-794, gnl|bosTau2|chr25 (5056407-5056248) | |
| 635-794, gnl|canFam2|chr6 (41805162-41805054) | |
| 635-794, gnl|danRer3|chr12 (13391571-13391677) | |
| 635-794, gnl|echTel1|scaffold_288174 (122956-122848) | |
| 635-794, gnl|fr1|chrUn (64970729-64970837) | |
| 635-794, gnl|galGal2|chr14 (8526697-8526805) | |
| 635-794, gnl|hg17|chr16 (2197193-2197301) | |
| 635-794, gnl|Hg17|chr16 (2197193-2197351) | |
| 635-794, gnl|mm7|chr17 (22658162-22658054) | |
| 635-794, gnl|Mm7|chr17 (22658161-22658002) | |
| 635-794, gnl|monDom2|scaffold_5 (120806012-120805906) | |
| 635-794, gnl|panTro1|chr18 (2009326-2009434) | |
| 635-794, gnl|rheMac2|chr20 (2203108-2203216) | |
| 635-794, gnl|rn3|chr10 (13729282-13729174) | |
| 635-794, gnl|tetNig1|chr2 (3605203-3605095) | |
| 635-794, gnl|xenTro1|scaffold_12 (1536589-1536481) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 132-346, gnl|bosTau2|chr25 (5057627-5057413) | |
| 132-346, gnl|Hg17|chr16 (2196024-2196216) | |
| 132-346, gnl|Mm7|chr17 (22659362-22659145) | |
| 390-563, gnl|bosTau2|chr25 (5057163-5056989) | |
| 390-563, gnl|Hg17|chr16 (2196489-2196663) | |
| 390-563, gnl|Mm7|chr17 (22658860-22658686) | |
| 635-794, gnl|bosTau2|chr25 (5056407-5056248) | |
| 635-794, gnl|canFam2|chr6 (41805162-41805054) | |
| 635-794, gnl|danRer3|chr12 (13391571-13391677) | |
| 635-794, gnl|echTel1|scaffold_288174 (122956-122848) | |
| 635-794, gnl|fr1|chrUn (64970729-64970837) | |
| 635-794, gnl|galGal2|chr14 (8526697-8526805) | |
| 635-794, gnl|hg17|chr16 (2197193-2197301) | |
| 635-794, gnl|Hg17|chr16 (2197193-2197351) | |
| 635-794, gnl|mm7|chr17 (22658162-22658054) | |
| 635-794, gnl|Mm7|chr17 (22658161-22658002) | |
| 635-794, gnl|monDom2|scaffold_5 (120806012-120805906) | |
| 635-794, gnl|panTro1|chr18 (2009326-2009434) | |
| 635-794, gnl|rheMac2|chr20 (2203108-2203216) | |
| 635-794, gnl|rn3|chr10 (13729282-13729174) | |
| 635-794, gnl|tetNig1|chr2 (3605203-3605095) | |
| 635-794, gnl|xenTro1|scaffold_12 (1536589-1536481) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.267344) | |
| cty (0.10408) |