Ss1.1-rplac_16079.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGACTTTCAGACATGGGGACTCCCGCAGGCTTGCAGACGGACTGTGAGGCGCTGCTCAGC CGCTTCCAAAAGATGGACAGCGTGCGCTTCGAGGACTTCACCGAACTCTGGAGGAAGATG AAGTTCGGGACCATCTTCTGTGGCAAAATGAGACATTTAGAAAAGAACACATTTACAAAA GAAGCTTTGGCTTTGGCTTGGCGATATTTTCTACCTCCATATGCCTTCCAGATCAGAGTT GGTGCTTTGTATCTGCTCTATGGATTATATAACGCCCAACTATGTCAACCTAAACAAAAG ATTAGAGTCGCCCTGAAGGATTGGGATGAAATTTTAAAATTTCAGCAAGATTTGATAAAT GCACAACATTTTGATGCAGCTTATATTTTTAGGAAGCTTCGACTAGACAGAGCATTTCAC TTTGCAGCCATGCCTAAATTGTTGTCATACAGAATGAAGAAGAAAATTCAGCGAGCGGAG GTTACAGAAGAATTTAAGGACCCAAATGATCGTGTCATGAAACTTATCACTTCTGATGTA CTAGAGGAAATGCTGAATGTTCATGACCATTATCAAAGAATGAAACAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGACTTTCAGACATGGGGACTCCCGCAGGCTTGCAGACGGACTGTGAGGCGCTGCTCAGC CGCTTCCAAAAGATGGACAGCGTGCGCTTCGAGGACTTCACCGAACTCTGGAGGAAGATG AAGTTCGGGACCATCTTCTGTGGCAAAATGAGACATTTAGAAAAGAACACATTTACAAAA GAAGCTTTGGCTTTGGCTTGGCGATATTTTCTACCTCCATATGCCTTCCAGATCAGAGTT GGTGCTTTGTATCTGCTCTATGGATTATATAACGCCCAACTATGTCAACCTAAACAAAAG ATTAGAGTCGCCCTGAAGGATTGGGATGAAATTTTAAAATTTCAGCAAGATTTGATAAAT GCACAACATTTTGATGCAGCTTATATTTTTAGGAAGCTTCGACTAGACAGAGCATTTCAC TTTGCAGCCATGCCTAAATTGTTGTCATACAGAATGAAGAAGAAAATTCAGCGAGCGGAG GTTACAGAAGAATTTAAGGACCCAAATGATCGTGTCATGAAACTTATCACTTCTGATGTA CTAGAGGAAATGCTGAATGTTCATGACCATTATCAAAGAATGAAACAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 5-140, gnl|bosTau2|chr10 (49776046-49775911) | |
| 5-140, gnl|Hg17|chr14 (61298906-61299059) | |
| 5-140, gnl|Mm7|chr12 (71917344-71917479) | |
| 299-457, gnl|bosTau2|chr10 (49771103-49770944) | |
| 299-457, gnl|canFam2|chr8 (39699551-39699724) | |
| 299-457, gnl|danRer3|chr20 (23501622-23501771) | |
| 299-457, gnl|dasNov1|scaffold_69674 (7496-7671) | |
| 299-457, gnl|echTel1|scaffold_308709 (33082-32913) | |
| 299-457, gnl|fr1|chrUn (298347114-298346951) | |
| 299-457, gnl|galGal2|chr5 (50707074-50706902) | |
| 299-457, gnl|hg17|chr14 (61303669-61303845) | |
| 299-457, gnl|Hg17|chr14 (61303681-61303840) | |
| 299-457, gnl|loxAfr1|scaffold_365 (45032-44856) | |
| 299-457, gnl|mm7|chr12 (71920957-71921137) | |
| 299-457, gnl|Mm7|chr12 (71920970-71921128) | |
| 299-457, gnl|monDom2|scaffold_8 (74696622-74696800) | |
| 299-457, gnl|oryCun1|scaffold_185567 (6620-6443) | |
| 299-457, gnl|panTro1|chr15 (60871336-60871512) | |
| 299-457, gnl|rheMac2|chr7 (124766338-124766514) | |
| 299-457, gnl|rn3|chr6 (96487850-96488028) | |
| 299-457, gnl|tetNig1|chr10 (12739100-12739268) | |
| 299-457, gnl|xenTro1|scaffold_673 (366277-366103) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-140, gnl|bosTau2|chr10 (49776046-49775911) | |
| 5-140, gnl|Hg17|chr14 (61298906-61299059) | |
| 5-140, gnl|Mm7|chr12 (71917344-71917479) | |
| 299-457, gnl|bosTau2|chr10 (49771103-49770944) | |
| 299-457, gnl|canFam2|chr8 (39699551-39699724) | |
| 299-457, gnl|danRer3|chr20 (23501622-23501771) | |
| 299-457, gnl|dasNov1|scaffold_69674 (7496-7671) | |
| 299-457, gnl|echTel1|scaffold_308709 (33082-32913) | |
| 299-457, gnl|fr1|chrUn (298347114-298346951) | |
| 299-457, gnl|galGal2|chr5 (50707074-50706902) | |
| 299-457, gnl|hg17|chr14 (61303669-61303845) | |
| 299-457, gnl|Hg17|chr14 (61303681-61303840) | |
| 299-457, gnl|loxAfr1|scaffold_365 (45032-44856) | |
| 299-457, gnl|mm7|chr12 (71920957-71921137) | |
| 299-457, gnl|Mm7|chr12 (71920970-71921128) | |
| 299-457, gnl|monDom2|scaffold_8 (74696622-74696800) | |
| 299-457, gnl|oryCun1|scaffold_185567 (6620-6443) | |
| 299-457, gnl|panTro1|chr15 (60871336-60871512) | |
| 299-457, gnl|rheMac2|chr7 (124766338-124766514) | |
| 299-457, gnl|rn3|chr6 (96487850-96488028) | |
| 299-457, gnl|tetNig1|chr10 (12739100-12739268) | |
| 299-457, gnl|xenTro1|scaffold_673 (366277-366103) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| liv (0.292569) | |
| pla (0.133672) |