Ss1.1-rplac_1654.5
|
AGGCTTCAGGTCCCCCCTGAATCTCAACTCCATGGTTAACAACATCAACCAGCCTTTGGA
GATCACGGCCATCTCATCCCCTGAGAGCTCTCTGAAGAGTTCCCCTGTCCCCTACCAGGA
CAATGACCAGCCCCCCGTGCTCAAGAAGGAAAAGCCCCTGAGCCAGACCAACGGGGCCCA
CTACTCCCCACTGACCTCGGACGAGGAGCAGGGCTCGGAGGATGAGCCCGGCAGTGCCAG
AATCGAGAGAAAAATTGCAACAATCTCCTTAGAAAGCAAATCTCCTCCGAAAACCTTGGA
AAATGGTGGCGGCCTGGCGGGAAGGAAGGTGCCGCCGGCCAGCGAGCCAGTCAACAGCAG
CAAGTGGAAGTCCACGTTCTCGCTCATCTCCGACCTTGGCCTGTCCAGGGCGGCTGATAG
CCCGTTGCAGGCCAGCTCCACTCTGAGCCACAGCTCCCTGTTTGCTTTCCGGCCCAGCCT
GGAGGAGCCCAGCTCAGCCGACACCAAGCTGGCCGCCCACTCCAGGAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGGCTTCAGGTCCCCCCTGAATCTCAACTCCATGGTTAACAACATCAACCAGCCTTTGGA
GATCACGGCCATCTCATCCCCTGAGAGCTCTCTGAAGAGTTCCCCTGTCCCCTACCAGGA
CAATGACCAGCCCCCCGTGCTCAAGAAGGAAAAGCCCCTGAGCCAGACCAACGGGGCCCA
CTACTCCCCACTGACCTCGGACGAGGAGCAGGGCTCGGAGGATGAGCCCGGCAGTGCCAG
AATCGAGAGAAAAATTGCAACAATCTCCTTAGAAAGCAAATCTCCTCCGAAAACCTTGGA
AAATGGTGGCGGCCTGGCGGGAAGGAAGGTGCCGCCGGCCAGCGAGCCAGTCAACAGCAG
CAAGTGGAAGTCCACGTTCTCGCTCATCTCCGACCTTGGCCTGTCCAGGGCGGCTGATAG
CCCGTTGCAGGCCAGCTCCACTCTGAGCCACAGCTCCCTGTTTGCTTTCCGGCCCAGCCT
GGAGGAGCCCAGCTCAGCCGACACCAAGCTGGCCGCCCACTCCAGGAA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
34-240, gnl|bosTau2|chr7 (18159507-18159713) |
|
34-240, gnl|canFam2|chr20 (59953311-59953097) |
|
34-240, gnl|danRer3|chr22 (20388191-20388397) |
|
34-240, gnl|fr1|chrUn (97746293-97746105) |
|
34-240, gnl|galGal2|chr28 (1068365-1068148) |
|
34-240, gnl|hg17|chr19 (2174274-2174491) |
|
34-240, gnl|Hg17|chr19 (2174279-2174485) |
|
34-240, gnl|mm7|chr10 (80578923-80579142) |
|
34-240, gnl|Mm7|chr10 (80578930-80579136) |
|
34-240, gnl|monDom2|scaffold_75 (4224588-4224805) |
|
34-240, gnl|panTro1|chr20 (2287056-2287273) |
|
34-240, gnl|rheMac2|chr19 (2022724-2022941) |
|
34-240, gnl|rn3|chr7 (10435358-10435139) |
|
34-240, gnl|tetNig1|chrUn_random (42494838-42495009) |
|
34-240, gnl|xenTro1|scaffold_296 (392569-392349) |
| |
|
305-528, gnl|bosTau2|chr7 (18162159-18162382) |
|
305-528, gnl|Hg17|chr19 (2177181-2177401) |
|
305-528, gnl|Mm7|chr10 (80580227-80580447) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
34-240, gnl|bosTau2|chr7 (18159507-18159713) |
|
34-240, gnl|canFam2|chr20 (59953311-59953097) |
|
34-240, gnl|danRer3|chr22 (20388191-20388397) |
|
34-240, gnl|fr1|chrUn (97746293-97746105) |
|
34-240, gnl|galGal2|chr28 (1068365-1068148) |
|
34-240, gnl|hg17|chr19 (2174274-2174491) |
|
34-240, gnl|Hg17|chr19 (2174279-2174485) |
|
34-240, gnl|mm7|chr10 (80578923-80579142) |
|
34-240, gnl|Mm7|chr10 (80578930-80579136) |
|
34-240, gnl|monDom2|scaffold_75 (4224588-4224805) |
|
34-240, gnl|panTro1|chr20 (2287056-2287273) |
|
34-240, gnl|rheMac2|chr19 (2022724-2022941) |
|
34-240, gnl|rn3|chr7 (10435358-10435139) |
|
34-240, gnl|tetNig1|chrUn_random (42494838-42495009) |
|
34-240, gnl|xenTro1|scaffold_296 (392569-392349) |
| |
|
305-528, gnl|bosTau2|chr7 (18162159-18162382) |
|
305-528, gnl|Hg17|chr19 (2177181-2177401) |
|
305-528, gnl|Mm7|chr10 (80580227-80580447) |
|
nep (0.183925) |
|
pla (0.133672) |
|
nep (0.183925) |
|
pla (0.133672) |
