Ss1.1-rplac_16545.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGCGGGAGCTTCAGGAGCTGCGCGGGCGCAGGGAGCTGTGGGCCGTGATGGCCCAGCCG GGACGAGTAACGCGCTCAGGTGCGAGATATTCAGAGAACACTGTAGGAAGAACACAGTCC ATGAAAGATAAACCTGGCCGAAAGCACAAGCCTACTGATGTATTTGATTTTCCTGATAAT TCTGATATCTCAAGCATCAGCAGGCTGGGCGAAAATGAGAAAGATGAAGAACCCTATGAA ACGTTTGACCCTCCTTTACACAGCACTGCAATCTATGCTGACGAAGAAGAATTCTCCAGA CACGTCGGGCCATCTCTCCCCTCAACGCCTCAAGGAAAAGAAGCGAGAAGCAGTTCAGAC ACGTCTGAAATTGAAGAAAGTGAAAACGAGTCTGTGAAAATTAGTGCAAAGAAGCCGGGA AGAAAACTTAAGCCCATTAGTGATGAATCTGAAAGCACTGAAGAAAGTGATGTAAGAAGA AAAATTAAACCAGCAGAGAACATAAGCACACAACAGCATGAAGCTGTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGCGGGAGCTTCAGGAGCTGCGCGGGCGCAGGGAGCTGTGGGCCGTGATGGCCCAGCCG GGACGAGTAACGCGCTCAGGTGCGAGATATTCAGAGAACACTGTAGGAAGAACACAGTCC ATGAAAGATAAACCTGGCCGAAAGCACAAGCCTACTGATGTATTTGATTTTCCTGATAAT TCTGATATCTCAAGCATCAGCAGGCTGGGCGAAAATGAGAAAGATGAAGAACCCTATGAA ACGTTTGACCCTCCTTTACACAGCACTGCAATCTATGCTGACGAAGAAGAATTCTCCAGA CACGTCGGGCCATCTCTCCCCTCAACGCCTCAAGGAAAAGAAGCGAGAAGCAGTTCAGAC ACGTCTGAAATTGAAGAAAGTGAAAACGAGTCTGTGAAAATTAGTGCAAAGAAGCCGGGA AGAAAACTTAAGCCCATTAGTGATGAATCTGAAAGCACTGAAGAAAGTGATGTAAGAAGA AAAATTAAACCAGCAGAGAACATAAGCACACAACAGCATGAAGCTGTT |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 130-247, gnl|bosTau2|chr27 (10088597-10088480) | |
| 130-247, gnl|canFam2|chr16 (48788168-48788051) | |
| 130-247, gnl|dasNov1|scaffold_35867 (12441-12558) | |
| 130-247, gnl|echTel1|scaffold_274225 (3903-4002) | |
| 130-247, gnl|hg17|chr12 (25137895-25138012) | |
| 130-247, gnl|Hg17|chr4 (186025338-186025221) | |
| 130-247, gnl|mm7|chr8 (45334063-45333952) | |
| 130-247, gnl|Mm7|chr8 (45333951-45334062) | |
| 130-247, gnl|oryCun1|scaffold_177355 (6598-6720) | |
| 130-247, gnl|panTro1|chrUn_random (51538482-51538599) | |
| 130-247, gnl|rheMac2|chr11 (25370446-25370564) | |
| 130-247, gnl|rn3|chr16 (49016787-49016895) | |
| 413-528, gnl|bosTau2|chr27 (10035026-10034914) | |
| 413-528, gnl|canFam2|chr16 (48799348-48799126) | |
| 413-528, gnl|canFam2|chr16 (48799125-48799334) | |
| 413-528, gnl|canFam2|chr16 (48799393-48798859) | |
| 413-528, gnl|dasNov1|scaffold_34243 (12086-11852) | |
| 413-528, gnl|dasNov1|scaffold_34243 (11832-12055) | |
| 413-528, gnl|dasNov1|scaffold_35867 (2461-2947) | |
| 413-528, gnl|hg17|chr11 (13734810-13735039) | |
| 413-528, gnl|hg17|chr12 (25137502-25137732) | |
| 413-528, gnl|hg17|chr4 (186012673-186013168) | |
| 413-528, gnl|Hg17|chr4 (186012938-186012823) | |
| 413-528, gnl|mm7|chr8 (45340511-45340287) | |
| 413-528, gnl|mm7|chr8 (45340286-45340480) | |
| 413-528, gnl|mm7|chr8 (45340550-45340134) | |
| 413-528, gnl|Mm7|chr8 (45340285-45340397) | |
| 413-528, gnl|oryCun1|scaffold_177355 (6207-6438) | |
| 413-528, gnl|oryCun1|scaffold_177355 (6433-6238) | |
| 413-528, gnl|oryCun1|scaffold_80635 (18808-18358) | |
| 413-528, gnl|panTro1|chr3 (204218422-204218917) | |
| 413-528, gnl|panTro1|chr9 (13948285-13948511) | |
| 413-528, gnl|panTro1|chrUn_random (51538099-51538319) | |
| 413-528, gnl|rheMac2|chr11 (25370049-25370282) | |
| 413-528, gnl|rheMac2|chr11 (25370293-25370080) | |
| 413-528, gnl|rheMac2|chr5 (176817658-176818153) | |
| 413-528, gnl|rn3|chr16 (49012694-49012921) | |
| 413-528, gnl|rn3|chr16 (49012922-49012725) | |
| 413-528, gnl|rn3|chr16 (49012657-49013089) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 130-247, gnl|bosTau2|chr27 (10088597-10088480) | |
| 130-247, gnl|canFam2|chr16 (48788168-48788051) | |
| 130-247, gnl|dasNov1|scaffold_35867 (12441-12558) | |
| 130-247, gnl|echTel1|scaffold_274225 (3903-4002) | |
| 130-247, gnl|hg17|chr12 (25137895-25138012) | |
| 130-247, gnl|Hg17|chr4 (186025338-186025221) | |
| 130-247, gnl|mm7|chr8 (45334063-45333952) | |
| 130-247, gnl|Mm7|chr8 (45333951-45334062) | |
| 130-247, gnl|oryCun1|scaffold_177355 (6598-6720) | |
| 130-247, gnl|panTro1|chrUn_random (51538482-51538599) | |
| 130-247, gnl|rheMac2|chr11 (25370446-25370564) | |
| 130-247, gnl|rn3|chr16 (49016787-49016895) | |
| 413-528, gnl|bosTau2|chr27 (10035026-10034914) | |
| 413-528, gnl|canFam2|chr16 (48799348-48799126) | |
| 413-528, gnl|canFam2|chr16 (48799125-48799334) | |
| 413-528, gnl|canFam2|chr16 (48799393-48798859) | |
| 413-528, gnl|dasNov1|scaffold_34243 (12086-11852) | |
| 413-528, gnl|dasNov1|scaffold_34243 (11832-12055) | |
| 413-528, gnl|dasNov1|scaffold_35867 (2461-2947) | |
| 413-528, gnl|hg17|chr11 (13734810-13735039) | |
| 413-528, gnl|hg17|chr12 (25137502-25137732) | |
| 413-528, gnl|hg17|chr4 (186012673-186013168) | |
| 413-528, gnl|Hg17|chr4 (186012938-186012823) | |
| 413-528, gnl|mm7|chr8 (45340511-45340287) | |
| 413-528, gnl|mm7|chr8 (45340286-45340480) | |
| 413-528, gnl|mm7|chr8 (45340550-45340134) | |
| 413-528, gnl|Mm7|chr8 (45340285-45340397) | |
| 413-528, gnl|oryCun1|scaffold_177355 (6207-6438) | |
| 413-528, gnl|oryCun1|scaffold_177355 (6433-6238) | |
| 413-528, gnl|oryCun1|scaffold_80635 (18808-18358) | |
| 413-528, gnl|panTro1|chr3 (204218422-204218917) | |
| 413-528, gnl|panTro1|chr9 (13948285-13948511) | |
| 413-528, gnl|panTro1|chrUn_random (51538099-51538319) | |
| 413-528, gnl|rheMac2|chr11 (25370049-25370282) | |
| 413-528, gnl|rheMac2|chr11 (25370293-25370080) | |
| 413-528, gnl|rheMac2|chr5 (176817658-176818153) | |
| 413-528, gnl|rn3|chr16 (49012694-49012921) | |
| 413-528, gnl|rn3|chr16 (49012922-49012725) | |
| 413-528, gnl|rn3|chr16 (49012657-49013089) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eli (0.151814) | |
| pla (0.133672) |