Ss1.1-rplac_16557.5
|
TTCCAGACAGGTCTCCATAACCCACGAGGTCTCCAAGTCCTTCATCCTCCTCACTCTGGC
TGAAGCTGAATATGGGAGCCCAGAGGAGCCCAGAGGCTGCCCCCTGACCTGACAGTTCCA
GGCTGGTAAATGAGAGGAGGGGATGAATTAAATTTGCTTTTTTGAGCAAGCCAATGAAGT
GTTTATTCTTCCGCAGGTGAGGATATATCTGGCACAAGGCCTTCTCTTTGGAAAGGATCT
CTTTGTTAATCTTTACCAAGTTTTCTGGTCATCTCTGACTCTCATTTCTTGGGTCTTTAT
TCTTGGTATGATGTGATTGGTTGTGGGTGATGGTTTGTTTTTTTGCCTCCACCCTAAATA
GTTTAAAGTAGATNTGGAGATGGCTCCTTTGATCTGGTTTTGCCATATGTNCTGGGCCAG
TCTGTGCTGCAGGACTATTTGTTAAAGGTTAATCACATTTTTTTTNGCAGGTTGTTTCTG
------------ATGAGTGTATGGAAGACTTCCATCCTTGTGATAAAGGAAAGTATTGAA
AGCACAAATGGCCCAAATTTATTC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTCCAGACAGGTCTCCATAACCCACGAGGTCTCCAAGTCCTTCATCCTCCTCACTCTGGC
TGAAGCTGAATATGGGAGCCCAGAGGAGCCCAGAGGCTGCCCCCTGACCTGACAGTTCCA
GGCTGGTAAATGAGAGGAGGGGATGAATTAAATTTGCTTTTTTGAGCAAGCCAATGAAGT
GTTTATTCTTCCGCAGGTGAGGATATATCTGGCACAAGGCCTTCTCTTTGGAAAGGATCT
CTTTGTTAATCTTTACCAAGTTTTCTGGTCATCTCTGACTCTCATTTCTTGGGTCTTTAT
TCTTGGTATGATGTGATTGGTTGTGGGTGATGGTTTGTTTTTTTGCCTCCACCCTAAATA
GTTTAAAGTAGATNTGGAGATGGCTCCTTTGATCTGGTTTTGCCATATGTNCTGGGCCAG
TCTGTGCTGCAGGACTATTTGTTAAAGGTTAATCACATTTTTTTTNGCAGGTTGTTTCTG
------------ATGAGTGTATGGAAGACTTCCATCCTTGTGATAAAGGAAAGTATTGAA
AGCACAAATGGCCCAAATTTATTC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-224, gnl|bosTau2|chr19 (27908928-27909143) |
|
1-224, gnl|canFam2|chr9 (29920190-29920749) |
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1-224, gnl|dasNov1|scaffold_95450 (785-227) |
|
1-224, gnl|echTel1|scaffold_310410 (39211-39732) |
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1-224, gnl|hg17|chr17 (46124144-46124710) |
|
1-224, gnl|Hg17|chr17 (46124427-46124665) |
|
1-224, gnl|loxAfr1|scaffold_10464 (62636-62085) |
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1-224, gnl|mm7|chr11 (94452245-94451755) |
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1-224, gnl|monDom2|scaffold_124 (2880997-2880459) |
|
1-224, gnl|oryCun1|scaffold_156943 (12700-12202) |
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1-224, gnl|panTro1|chr19_random (31762520-31763076) |
|
1-224, gnl|rheMac2|chr16 (34935852-34936412) |
|
1-224, gnl|rn3|chr10 (83000831-83000391) |
| |
|
257-552, gnl|bosTau2|chr19 (27909143-27909441) |
|
257-552, gnl|Hg17|chr17 (46124665-46125005) |
|
257-552, gnl|Mm7|chr11 (94451790-94451440) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-224, gnl|bosTau2|chr19 (27908928-27909143) |
|
1-224, gnl|canFam2|chr9 (29920190-29920749) |
|
1-224, gnl|dasNov1|scaffold_95450 (785-227) |
|
1-224, gnl|echTel1|scaffold_310410 (39211-39732) |
|
1-224, gnl|hg17|chr17 (46124144-46124710) |
|
1-224, gnl|Hg17|chr17 (46124427-46124665) |
|
1-224, gnl|loxAfr1|scaffold_10464 (62636-62085) |
|
1-224, gnl|mm7|chr11 (94452245-94451755) |
|
1-224, gnl|monDom2|scaffold_124 (2880997-2880459) |
|
1-224, gnl|oryCun1|scaffold_156943 (12700-12202) |
|
1-224, gnl|panTro1|chr19_random (31762520-31763076) |
|
1-224, gnl|rheMac2|chr16 (34935852-34936412) |
|
1-224, gnl|rn3|chr10 (83000831-83000391) |
| |
|
257-552, gnl|bosTau2|chr19 (27909143-27909441) |
|
257-552, gnl|Hg17|chr17 (46124665-46125005) |
|
257-552, gnl|Mm7|chr11 (94451790-94451440) |
|
mcp (0.170648) |
|
pla (0.133672) |
|
mcp (0.170648) |
|
pla (0.133672) |
