Non-Coding RNA Search

Ss1.1-rplac_16582.5

Sequence:


               
               CGCATTGGTTTTTTTTTTTTTTTTTCAAAAAAATATCCTGTCATATCTTAGTGCTTTTGT
TAACTAAAAGGAAACCTGAATATTTTCCAGTAGGTTGCTATGTTAGAAATGGGATTTAAA
GTTTAAACTTCTTAAGGAGTTACCTTGTTTACATTAATACCTAAGAAATAGTAGTTTTTA
GCAATGTTGAATAATTTGCAACTATTATTTTTATGAGGGAAGGCTTAAATCTAATATATA
AAGGTTTGATTGCTATCCTAGTAAAATTAAAGGATTTATGGTGTCACAGAACACAAAACT
TTCTGTATGTATAACAGGGCTGTGGTGATCTATACTGGGGGTCTATTTTATAGAAGTACT
AGGAAAGCTGAAAGGGAGAGGGGAAGATACTCTTAAACCAGCCTAGTTAATGAAGCGGCC
ATGAGACCAGTTAAAGCAAATTAGCCATACTTTGTTTTTGTTTTTAGTAGTAAATATGCT
CCTTTTACAGTTTTAGTGAGTGAAAAGGCCTAAGTTGCTCTCCCTGGTCCAGGCATCTGT
CCAAAAATTTAAAGTGTATCTGAGATGTGGTGAAAGACTTGTTGTAGGTAAATAAATGAG
CATAGTTGATATTGAGCAGAAAGGTAGCAATATACTTCAGTTTTGTTTTCATCTGAAAAA
AAAAAGTACATAGGCCTAGCAGCATTAGTACTGTTCTTGATAAATAAGTCTTTTGACATT
AAACTTGAAGGAAAACTTTAAGGAAGTTGAGTGATGGTCTTAATGGCCTAAGTGAAAATT
GGTGTGAAATTGGGATGGTTATTTACACTAATAATCAAAGCTTAAGGAGACAGAGAAACC
AAATTGTCCATTGGTCATAAGTGCTTCGAATAACTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCATTGGTTTTTTTTTTTTTTTTTCAAAAAAATATCCTGTCATATCTTAGTGCTTTTGT
TAACTAAAAGGAAACCTGAATATTTTCCAGTAGGTTGCTATGTTAGAAATGGGATTTAAA
GTTTAAACTTCTTAAGGAGTTACCTTGTTTACATTAATACCTAAGAAATAGTAGTTTTTA
GCAATGTTGAATAATTTGCAACTATTATTTTTATGAGGGAAGGCTTAAATCTAATATATA
AAGGTTTGATTGCTATCCTAGTAAAATTAAAGGATTTATGGTGTCACAGAACACAAAACT
TTCTGTATGTATAACAGGGCTGTGGTGATCTATACTGGGGGTCTATTTTATAGAAGTACT
AGGAAAGCTGAAAGGGAGAGGGGAAGATACTCTTAAACCAGCCTAGTTAATGAAGCGGCC
ATGAGACCAGTTAAAGCAAATTAGCCATACTTTGTTTTTGTTTTTAGTAGTAAATATGCT
CCTTTTACAGTTTTAGTGAGTGAAAAGGCCTAAGTTGCTCTCCCTGGTCCAGGCATCTGT
CCAAAAATTTAAAGTGTATCTGAGATGTGGTGAAAGACTTGTTGTAGGTAAATAAATGAG
CATAGTTGATATTGAGCAGAAAGGTAGCAATATACTTCAGTTTTGTTTTCATCTGAAAAA
AAAAAGTACATAGGCCTAGCAGCATTAGTACTGTTCTTGATAAATAAGTCTTTTGACATT
AAACTTGAAGGAAAACTTTAAGGAAGTTGAGTGATGGTCTTAATGGCCTAAGTGAAAATT
GGTGTGAAATTGGGATGGTTATTTACACTAATAATCAAAGCTTAAGGAGACAGAGAAACC
AAATTGTCCATTGGTCATAAGTGCTTCGAATAACTG

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               28-851, gnl|bosTau2|chr4 (12116372-12115556)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               28-851, gnl|bosTau2|chr4 (12116372-12115556)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               pla (0.133672)
               

               
               ova (0.129132)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)
               

               
               ova (0.129132)