Ss1.1-rplac_17130.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACAGCCTGTCGCTGGACAAGCACGGGGACGACCAGCTGGACAGCAGCAGCCTCAGGAGCA GGGGCAGCGTGCACTCGACCGCCAGCAGCGAGCACAAAGGCCTGAGACACACGCCTTGGC GCGGGAGTCACGGAGGAGCGCGTGTTTCTGGAGCCCGTCCTCCCCCCCCTCCTTGATTAG GTATCGGGTGCACTTGGAATTAGACACATATTTATTTTAATGACCATCATCCATGTGGGG GCTAATGTGTTGTTTCCTCTCACCTTTGAAGTCTTTCCGTGTAACTGTATAATCTCTGTT TTTCTTTTGCACCTTAAGTCTCCGCAATTAAGAGGTTCCGTTTCGGTGCAGCAGGGAGGG GCCCCGTCTGTGTGCGTCTGGTCTGGTGGCGGGAAGGACGGGCGTCTCGGACCGTGCTCT GCTGTCCGCCAAGCTGCAGTCACGCCGTACCCATGATTAATTTGCTTTAGGTTGTAAATT TAATTGTACATATGGTTGATTTATTATTTTTAAAAGCACAGACTAACTGATGTGCTGTTT TATGTATAAGTTGCACCAAAAATCAAGGACAAAATAAATGTGTGTTTGTTTTATTGGTGT GAAAGTCACAGCTTGTAAATAAGTGTTGTATGTATTAAGCCTTTTCCAGCTCTCCAAAGC GCTGTATTTTTGTACATAGGAGATAGAGAACTCTCAGTTCACCAGGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACAGCCTGTCGCTGGACAAGCACGGGGACGACCAGCTGGACAGCAGCAGCCTCAGGAGCA GGGGCAGCGTGCACTCGACCGCCAGCAGCGAGCACAAAGGCCTGAGACACACGCCTTGGC GCGGGAGTCACGGAGGAGCGCGTGTTTCTGGAGCCCGTCCTCCCCCCCCTCCTTGATTAG GTATCGGGTGCACTTGGAATTAGACACATATTTATTTTAATGACCATCATCCATGTGGGG GCTAATGTGTTGTTTCCTCTCACCTTTGAAGTCTTTCCGTGTAACTGTATAATCTCTGTT TTTCTTTTGCACCTTAAGTCTCCGCAATTAAGAGGTTCCGTTTCGGTGCAGCAGGGAGGG GCCCCGTCTGTGTGCGTCTGGTCTGGTGGCGGGAAGGACGGGCGTCTCGGACCGTGCTCT GCTGTCCGCCAAGCTGCAGTCACGCCGTACCCATGATTAATTTGCTTTAGGTTGTAAATT TAATTGTACATATGGTTGATTTATTATTTTTAAAAGCACAGACTAACTGATGTGCTGTTT TATGTATAAGTTGCACCAAAAATCAAGGACAAAATAAATGTGTGTTTGTTTTATTGGTGT GAAAGTCACAGCTTGTAAATAAGTGTTGTATGTATTAAGCCTTTTCCAGCTCTCCAAAGC GCTGTATTTTTGTACATAGGAGATAGAGAACTCTCAGTTCACCAGGAA |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-104, gnl|bosTau2|chr1 (91458737-91458840) | |
| 1-104, gnl|canFam2|chr31 (40331941-40332216) | |
| 1-104, gnl|danRer3|chr9 (5081870-5082178) | |
| 1-104, gnl|dasNov1|scaffold_120630 (1639-1917) | |
| 1-104, gnl|echTel1|scaffold_311417 (209006-209283) | |
| 1-104, gnl|fr1|chrUn (34630296-34630048) | |
| 1-104, gnl|galGal2|chrUn (58495984-58495673) | |
| 1-104, gnl|hg17|chr21 (44347573-44347848) | |
| 1-104, gnl|Hg17|chr21 (44347620-44347723) | |
| 1-104, gnl|loxAfr1|scaffold_11960 (44060-44333) | |
| 1-104, gnl|mm7|chr10 (77842728-77842454) | |
| 1-104, gnl|Mm7|chr10 (77842680-77842577) | |
| 1-104, gnl|monDom2|scaffold_29 (10552332-10552601) | |
| 1-104, gnl|panTro1|chr22 (44510213-44510488) | |
| 1-104, gnl|rheMac2|chr3 (2612558-2612283) | |
| 1-104, gnl|rn3|chr20 (10833107-10833381) | |
| 1-104, gnl|tetNig1|chr2 (7141107-7141369) | |
| 1-104, gnl|xenTro1|scaffold_819 (30677-30953) | |
| 143-708, gnl|bosTau2|chr1 (91459617-91460192) | |
| 143-708, gnl|Hg17|chr21 (44348526-44349092) | |
| 143-708, gnl|Mm7|chr10 (77841827-77841279) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-104, gnl|bosTau2|chr1 (91458737-91458840) | |
| 1-104, gnl|canFam2|chr31 (40331941-40332216) | |
| 1-104, gnl|danRer3|chr9 (5081870-5082178) | |
| 1-104, gnl|dasNov1|scaffold_120630 (1639-1917) | |
| 1-104, gnl|echTel1|scaffold_311417 (209006-209283) | |
| 1-104, gnl|fr1|chrUn (34630296-34630048) | |
| 1-104, gnl|galGal2|chrUn (58495984-58495673) | |
| 1-104, gnl|hg17|chr21 (44347573-44347848) | |
| 1-104, gnl|Hg17|chr21 (44347620-44347723) | |
| 1-104, gnl|loxAfr1|scaffold_11960 (44060-44333) | |
| 1-104, gnl|mm7|chr10 (77842728-77842454) | |
| 1-104, gnl|Mm7|chr10 (77842680-77842577) | |
| 1-104, gnl|monDom2|scaffold_29 (10552332-10552601) | |
| 1-104, gnl|panTro1|chr22 (44510213-44510488) | |
| 1-104, gnl|rheMac2|chr3 (2612558-2612283) | |
| 1-104, gnl|rn3|chr20 (10833107-10833381) | |
| 1-104, gnl|tetNig1|chr2 (7141107-7141369) | |
| 1-104, gnl|xenTro1|scaffold_819 (30677-30953) | |
| 143-708, gnl|bosTau2|chr1 (91459617-91460192) | |
| 143-708, gnl|Hg17|chr21 (44348526-44349092) | |
| 143-708, gnl|Mm7|chr10 (77841827-77841279) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.267344) | |
| cov (0.132153) |