Non-Coding RNA Search

Ss1.1-rplac_1722.5

Sequence:


               
               CTGCTCTATGTGCGGAAGGAGTCGGAAGAAGTCTTTGATGCCCTGATGCTCAGGACTCCG
TCTTTGAAAGGCTTGATGGAGGCTATCTCAGACAAATACGATGTTCCGCAAGACAAGATC
GGGAAAATATTCAAGAAGTGTAAAAAAGGGATCCTGGTGAACATGGACGACAACATCGTG
AAGCACTACTCCAACGAGGACACCTTCCAGCTGCAGATCGAGGAGGCCGCCGGCTCCTAC
AGGCTCACCCTCACGGAGATCTGAGGGCGCCCTGGGCCCGCTCCCCGCGGGCTCCGCGAA
GGTGTCCCATGGGCCCTTGGGTTCGGGCAGCCGCAGGGGCCCCCGCCAGCCGCCTTCCGG
CCGTGGGTGGATGGCAGCGGAGGGGACCCTTTGCGGCCGGCGGTGGCGCTGCCCTTGGCG
CGGAGACGGCTTTGAACACGTTGCATTGGCGTTTGCCGATGACCGAGAAACCGTAGACTC
TGCTATTTGAACGTTTTGATAGAAATGCTTAGGATCACAGGGGACAACTTTGTTCCGAGA
CTTAATAGCTTCTCTGGGAACCTGTCGGTTATCTGCTCCATTATTTATAAGCGCATTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCTCTATGTGCGGAAGGAGTCGGAAGAAGTCTTTGATGCCCTGATGCTCAGGACTCCG
TCTTTGAAAGGCTTGATGGAGGCTATCTCAGACAAATACGATGTTCCGCAAGACAAGATC
GGGAAAATATTCAAGAAGTGTAAAAAAGGGATCCTGGTGAACATGGACGACAACATCGTG
AAGCACTACTCCAACGAGGACACCTTCCAGCTGCAGATCGAGGAGGCCGCCGGCTCCTAC
AGGCTCACCCTCACGGAGATCTGAGGGCGCCCTGGGCCCGCTCCCCGCGGGCTCCGCGAA
GGTGTCCCATGGGCCCTTGGGTTCGGGCAGCCGCAGGGGCCCCCGCCAGCCGCCTTCCGG
CCGTGGGTGGATGGCAGCGGAGGGGACCCTTTGCGGCCGGCGGTGGCGCTGCCCTTGGCG
CGGAGACGGCTTTGAACACGTTGCATTGGCGTTTGCCGATGACCGAGAAACCGTAGACTC
TGCTATTTGAACGTTTTGATAGAAATGCTTAGGATCACAGGGGACAACTTTGTTCCGAGA
CTTAATAGCTTCTCTGGGAACCTGTCGGTTATCTGCTCCATTATTTATAAGCGCATTCTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               149-588, gnl|bosTau2|chr11 (68036879-68036460)
               

               
               149-588, gnl|Hg17|chr2 (10091318-10091756)
               

               
               149-588, gnl|Mm7|chr12 (22452316-22452728)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               149-588, gnl|bosTau2|chr11 (68036879-68036460)
               

               
               149-588, gnl|Hg17|chr2 (10091318-10091756)
               

               
               149-588, gnl|Mm7|chr12 (22452316-22452728)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.534688)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.534688)

	149-588, gnl\|bosTau2\|chr11 (68036879-68036460)
	149-588, gnl\|Hg17\|chr2 (10091318-10091756)
	149-588, gnl\|Mm7\|chr12 (22452316-22452728)