Ss1.1-rplac_18051.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCCACCTGTGGCGAGGAGGCCCCGGCGCGCGGCGCCCCGCGCCCCACCGAGGACCTCTA CTGCAAGTTGGTGGGGGGCCCCGTGGCCGGCGGGGACCCCAACCAGACCATCCAGGGCCA GTACTGTGACATCTGCACGGCAGCAAACAGCAACAGGGCACACCCCGCGAGCAACGCCAT TGACGGCACGGAGCGCTGGTGGCAGAGCCCACCGCTGTCCCGTGGCCTGGAGTACAACGA GGTCAACGTCACGCTGGACTTGGGCCAGGTTTTCCACGTGGCCTATGTGCTCATCAAGTT TGCCAACTCCCCTCGACCGGACCTCTGGGTGCTGGAGCGCTCCACGGACTTCGGCCTCAC CTACCAGCCATGGCAGTACTTCGCCTCCTCCAAGAGGGACTGCCTGGAGCGGTTCGGACC GCGGACGCTGGAGCGCATCTCCCGGGACGACGATGTCATCTGCAGCACCGAGTACTCGCG GATTGTGCCCCTGGAGAACGGCGAGATCGTGGTGTCCCTAGTGAATGGGCGCCCAGGGGC CATGAACTTCTCCTACTCGCCGCTGCTGCGTGACTTCACCAAAGCTACCAACATCCGCCT GCGCTTCCTGCGCACCAACACGCTCCTGGGCCATCTCATGGGCAAGGCGCTGCGGGACCC CACGGTCACTCGCCGGTACTATTACAGCATCAAGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCCACCTGTGGCGAGGAGGCCCCGGCGCGCGGCGCCCCGCGCCCCACCGAGGACCTCTA CTGCAAGTTGGTGGGGGGCCCCGTGGCCGGCGGGGACCCCAACCAGACCATCCAGGGCCA GTACTGTGACATCTGCACGGCAGCAAACAGCAACAGGGCACACCCCGCGAGCAACGCCAT TGACGGCACGGAGCGCTGGTGGCAGAGCCCACCGCTGTCCCGTGGCCTGGAGTACAACGA GGTCAACGTCACGCTGGACTTGGGCCAGGTTTTCCACGTGGCCTATGTGCTCATCAAGTT TGCCAACTCCCCTCGACCGGACCTCTGGGTGCTGGAGCGCTCCACGGACTTCGGCCTCAC CTACCAGCCATGGCAGTACTTCGCCTCCTCCAAGAGGGACTGCCTGGAGCGGTTCGGACC GCGGACGCTGGAGCGCATCTCCCGGGACGACGATGTCATCTGCAGCACCGAGTACTCGCG GATTGTGCCCCTGGAGAACGGCGAGATCGTGGTGTCCCTAGTGAATGGGCGCCCAGGGGC CATGAACTTCTCCTACTCGCCGCTGCTGCGTGACTTCACCAAAGCTACCAACATCCGCCT GCGCTTCCTGCGCACCAACACGCTCCTGGGCCATCTCATGGGCAAGGCGCTGCGGGACCC CACGGTCACTCGCCGGTACTATTACAGCATCAAGGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 113-270, gnl|bosTau2|chr13 (36021179-36021336) | |
| 113-270, gnl|canFam2|chr24 (49388113-49388288) | |
| 113-270, gnl|dasNov1|scaffold_63608 (1054-881) | |
| 113-270, gnl|echTel1|scaffold_325223 (48643-48466) | |
| 113-270, gnl|fr1|chrUn (125248668-125248479) | |
| 113-270, gnl|galGal2|chr20 (7633612-7633779) | |
| 113-270, gnl|hg17|chr20 (60370826-60371023) | |
| 113-270, gnl|Hg17|chr20 (60371006-60370849) | |
| 113-270, gnl|loxAfr1|scaffold_9085 (65680-65852) | |
| 113-270, gnl|mm7|chr2 (180722119-180722308) | |
| 113-270, gnl|Mm7|chr2 (180722294-180722137) | |
| 113-270, gnl|monDom2|scaffold_1 (179971313-179971491) | |
| 113-270, gnl|panTro1|chr21_random (18446031-18445834) | |
| 113-270, gnl|rheMac2|chr10 (2178127-2177931) | |
| 113-270, gnl|rn3|chr3 (169183583-169183769) | |
| 113-270, gnl|tetNig1|chr15 (6518935-6518752) | |
| 113-270, gnl|xenTro1|scaffold_220 (620107-620298) | |
| 504-676, gnl|bosTau2|chr13 (36029993-36030165) | |
| 504-676, gnl|canFam2|chr24 (49378452-49378655) | |
| 504-676, gnl|dasNov1|scaffold_3498 (46550-46372) | |
| 504-676, gnl|echTel1|scaffold_325223 (95178-94998) | |
| 504-676, gnl|fr1|chrUn (125254403-125254158) | |
| 504-676, gnl|galGal2|chr20 (7604492-7604701) | |
| 504-676, gnl|hg17|chr20 (60360345-60360554) | |
| 504-676, gnl|Hg17|chr20 (60360532-60360360) | |
| 504-676, gnl|loxAfr1|scaffold_9085 (32076-32253) | |
| 504-676, gnl|mm7|chr2 (180707839-180708042) | |
| 504-676, gnl|Mm7|chr2 (180708018-180707846) | |
| 504-676, gnl|monDom2|scaffold_1 (179912789-179912982) | |
| 504-676, gnl|oryCun1|scaffold_206574 (238782-238963) | |
| 504-676, gnl|rheMac2|chr10 (2188358-2188149) | |
| 504-676, gnl|rn3|chr3 (169171603-169171794) | |
| 504-676, gnl|tetNig1|chr15 (6525241-6524993) | |
| 504-676, gnl|xenTro1|scaffold_220 (597632-597853) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 113-270, gnl|bosTau2|chr13 (36021179-36021336) | |
| 113-270, gnl|canFam2|chr24 (49388113-49388288) | |
| 113-270, gnl|dasNov1|scaffold_63608 (1054-881) | |
| 113-270, gnl|echTel1|scaffold_325223 (48643-48466) | |
| 113-270, gnl|fr1|chrUn (125248668-125248479) | |
| 113-270, gnl|galGal2|chr20 (7633612-7633779) | |
| 113-270, gnl|hg17|chr20 (60370826-60371023) | |
| 113-270, gnl|Hg17|chr20 (60371006-60370849) | |
| 113-270, gnl|loxAfr1|scaffold_9085 (65680-65852) | |
| 113-270, gnl|mm7|chr2 (180722119-180722308) | |
| 113-270, gnl|Mm7|chr2 (180722294-180722137) | |
| 113-270, gnl|monDom2|scaffold_1 (179971313-179971491) | |
| 113-270, gnl|panTro1|chr21_random (18446031-18445834) | |
| 113-270, gnl|rheMac2|chr10 (2178127-2177931) | |
| 113-270, gnl|rn3|chr3 (169183583-169183769) | |
| 113-270, gnl|tetNig1|chr15 (6518935-6518752) | |
| 113-270, gnl|xenTro1|scaffold_220 (620107-620298) | |
| 504-676, gnl|bosTau2|chr13 (36029993-36030165) | |
| 504-676, gnl|canFam2|chr24 (49378452-49378655) | |
| 504-676, gnl|dasNov1|scaffold_3498 (46550-46372) | |
| 504-676, gnl|echTel1|scaffold_325223 (95178-94998) | |
| 504-676, gnl|fr1|chrUn (125254403-125254158) | |
| 504-676, gnl|galGal2|chr20 (7604492-7604701) | |
| 504-676, gnl|hg17|chr20 (60360345-60360554) | |
| 504-676, gnl|Hg17|chr20 (60360532-60360360) | |
| 504-676, gnl|loxAfr1|scaffold_9085 (32076-32253) | |
| 504-676, gnl|mm7|chr2 (180707839-180708042) | |
| 504-676, gnl|Mm7|chr2 (180708018-180707846) | |
| 504-676, gnl|monDom2|scaffold_1 (179912789-179912982) | |
| 504-676, gnl|oryCun1|scaffold_206574 (238782-238963) | |
| 504-676, gnl|rheMac2|chr10 (2188358-2188149) | |
| 504-676, gnl|rn3|chr3 (169171603-169171794) | |
| 504-676, gnl|tetNig1|chr15 (6525241-6524993) | |
| 504-676, gnl|xenTro1|scaffold_220 (597632-597853) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.267344) |