Non-Coding RNA Search

Ss1.1-rplac_1849.5

Sequence:


               
               CACAATCCACACCAGAAGATGTGAAATTCATTTGTGGCAATTAAGTGGTCCCAACGCTCA
GTGCTTTAAAAAAAAAAAAAAAAATCGGACAGCTACTTCTGGGAAAAACATCATTCCAAA
AATAACAATAAATGGGAGCAAATACAAAAATAACCAAGTCCTCTGAAGGCATCTCACGTA
ACCGTAGATTAGGAAATGCAAGCCCCAATACTAGGAAATCGGTGTTACTGCGTCATGTAT
CTGACAGTGATGAGATGTGCCGGCATTTATTTTCCGTGCTGTGTTTTCCCTTGCCTTATG
GGCTGAAGTGTTCGCTAGAATCCACGGGGTCACATCGAGGGGGTTTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACAATCCACACCAGAAGATGTGAAATTCATTTGTGGCAATTAAGTGGTCCCAACGCTCA
GTGCTTTAAAAAAAAAAAAAAAAATCGGACAGCTACTTCTGGGAAAAACATCATTCCAAA
AATAACAATAAATGGGAGCAAATACAAAAATAACCAAGTCCTCTGAAGGCATCTCACGTA
ACCGTAGATTAGGAAATGCAAGCCCCAATACTAGGAAATCGGTGTTACTGCGTCATGTAT
CTGACAGTGATGAGATGTGCCGGCATTTATTTTCCGTGCTGTGTTTTCCCTTGCCTTATG
GGCTGAAGTGTTCGCTAGAATCCACGGGGTCACATCGAGGGGGTTTCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-348, gnl|bosTau2|chr12 (45199143-45198793)
               

               
               1-348, gnl|Hg17|chr13 (105941809-105941469)
               

               
               1-348, gnl|Mm7|chr8 (8589034-8588679)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-348, gnl|bosTau2|chr12 (45199143-45198793)
               

               
               1-348, gnl|Hg17|chr13 (105941809-105941469)
               

               
               1-348, gnl|Mm7|chr8 (8589034-8588679)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               pla (0.133672)
               

               
               eru (0.120048)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)
               

               
               eru (0.120048)

	1-348, gnl\|bosTau2\|chr12 (45199143-45198793)
	1-348, gnl\|Hg17\|chr13 (105941809-105941469)
	1-348, gnl\|Mm7\|chr8 (8589034-8588679)