Ss1.1-rplac_2152.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGGACGGCGCTTCTCACGAGCCCTTCTCTGTGACTGAGGATTACCCACTTCACCCGTCC AGTATTGAAACGCAGCTCGTGGTCGGAGCTTGCTGGCAAGGTGGCGATCTGCACATGACC CAGTTTTTCCGAGGTAATCTGGCTGGCCTGACAATCCGTTCCGGGAAGTTGGCGGATAAG AAGGTGATTGACTGTCTGTATACCTGCAAAGAGGGGCTGGAGCTGCACCTCCCCGAAGAC AGCGGCAGAGGCGTCAAGATCCATGCCACCCCCAGCCAGTCAGTGTTGACCTTGGAGGGA GAGGACGTCGGGGACTTGGATAAGGCCATGCAGCACATTGCCTACCTGAATTCGCGACAG TTCCCCACCCCTGGGATCCGCAGGCTCAAAATCACCACCACAGTCACGTGTTTCAGCGAG GCCACCTGCATCTCCATCCCCCCGCTGGATGGCTACGTGATGGTCTTGCAGCCGGAGGAG CCCAAGATCAGCCTGAGTGGCATCCACCACTTTGCTCGAGCAGCTTCTGAATTTGAAAGC TCGGAGGGCGTTTTCCTTTTCCCGGAGCTTCGGATCATCAGCACCATCACGCGAGAAGTG GAGCCCGAAGGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGGACGGCGCTTCTCACGAGCCCTTCTCTGTGACTGAGGATTACCCACTTCACCCGTCC AGTATTGAAACGCAGCTCGTGGTCGGAGCTTGCTGGCAAGGTGGCGATCTGCACATGACC CAGTTTTTCCGAGGTAATCTGGCTGGCCTGACAATCCGTTCCGGGAAGTTGGCGGATAAG AAGGTGATTGACTGTCTGTATACCTGCAAAGAGGGGCTGGAGCTGCACCTCCCCGAAGAC AGCGGCAGAGGCGTCAAGATCCATGCCACCCCCAGCCAGTCAGTGTTGACCTTGGAGGGA GAGGACGTCGGGGACTTGGATAAGGCCATGCAGCACATTGCCTACCTGAATTCGCGACAG TTCCCCACCCCTGGGATCCGCAGGCTCAAAATCACCACCACAGTCACGTGTTTCAGCGAG GCCACCTGCATCTCCATCCCCCCGCTGGATGGCTACGTGATGGTCTTGCAGCCGGAGGAG CCCAAGATCAGCCTGAGTGGCATCCACCACTTTGCTCGAGCAGCTTCTGAATTTGAAAGC TCGGAGGGCGTTTTCCTTTTCCCGGAGCTTCGGATCATCAGCACCATCACGCGAGAAGTG GAGCCCGAAGGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 99-282, gnl|bosTau2|chr16 (30896237-30896051) | |
| 99-282, gnl|canFam2|chr5 (65941998-65942196) | |
| 99-282, gnl|danRer3|chr23 (41216457-41216625) | |
| 99-282, gnl|dasNov1|scaffold_14797 (11930-12121) | |
| 99-282, gnl|echTel1|scaffold_210017 (1932-2124) | |
| 99-282, gnl|fr1|chrUn (44974493-44974682) | |
| 99-282, gnl|galGal2|chr21 (3355383-3355574) | |
| 99-282, gnl|hg17|chr1 (9730206-9730399) | |
| 99-282, gnl|Hg17|chr1 (9730368-9730186) | |
| 99-282, gnl|loxAfr1|scaffold_5174 (49040-48850) | |
| 99-282, gnl|mm7|chr4 (148632897-148632714) | |
| 99-282, gnl|Mm7|chr4 (148632735-148632910) | |
| 99-282, gnl|monDom2|scaffold_177 (1021697-1021520) | |
| 99-282, gnl|oryCun1|scaffold_156203 (594-404) | |
| 99-282, gnl|panTro1|chr1 (9750776-9750969) | |
| 99-282, gnl|rheMac2|chr1 (12792295-12792489) | |
| 99-282, gnl|rn3|chr5 (166739639-166739450) | |
| 99-282, gnl|tetNig1|chr9 (2514695-2514864) | |
| 405-612, gnl|bosTau2|chr16 (30894418-30894211) | |
| 405-612, gnl|canFam2|chr5 (65940167-65940404) | |
| 405-612, gnl|danRer3|chr23 (41214584-41214825) | |
| 405-612, gnl|dasNov1|scaffold_14797 (7600-7824) | |
| 405-612, gnl|echTel1|scaffold_210017 (201-425) | |
| 405-612, gnl|fr1|chrUn (44973927-44974175) | |
| 405-612, gnl|galGal2|chr21 (3354079-3354314) | |
| 405-612, gnl|hg17|chr1 (9729258-9729493) | |
| 405-612, gnl|Hg17|chr1 (9729501-9729294) | |
| 405-612, gnl|loxAfr1|scaffold_6952 (42790-43027) | |
| 405-612, gnl|mm7|chr4 (148633758-148633521) | |
| 405-612, gnl|Mm7|chr4 (148633511-148633718) | |
| 405-612, gnl|monDom2|scaffold_177 (1022773-1022544) | |
| 405-612, gnl|oryCun1|scaffold_145956 (1727-1963) | |
| 405-612, gnl|panTro1|chr1 (9749828-9750063) | |
| 405-612, gnl|rheMac2|chr1 (12791032-12791267) | |
| 405-612, gnl|rn3|chr5 (166740474-166740237) | |
| 405-612, gnl|tetNig1|chr9 (2514065-2514318) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 99-282, gnl|bosTau2|chr16 (30896237-30896051) | |
| 99-282, gnl|canFam2|chr5 (65941998-65942196) | |
| 99-282, gnl|danRer3|chr23 (41216457-41216625) | |
| 99-282, gnl|dasNov1|scaffold_14797 (11930-12121) | |
| 99-282, gnl|echTel1|scaffold_210017 (1932-2124) | |
| 99-282, gnl|fr1|chrUn (44974493-44974682) | |
| 99-282, gnl|galGal2|chr21 (3355383-3355574) | |
| 99-282, gnl|hg17|chr1 (9730206-9730399) | |
| 99-282, gnl|Hg17|chr1 (9730368-9730186) | |
| 99-282, gnl|loxAfr1|scaffold_5174 (49040-48850) | |
| 99-282, gnl|mm7|chr4 (148632897-148632714) | |
| 99-282, gnl|Mm7|chr4 (148632735-148632910) | |
| 99-282, gnl|monDom2|scaffold_177 (1021697-1021520) | |
| 99-282, gnl|oryCun1|scaffold_156203 (594-404) | |
| 99-282, gnl|panTro1|chr1 (9750776-9750969) | |
| 99-282, gnl|rheMac2|chr1 (12792295-12792489) | |
| 99-282, gnl|rn3|chr5 (166739639-166739450) | |
| 99-282, gnl|tetNig1|chr9 (2514695-2514864) | |
| 405-612, gnl|bosTau2|chr16 (30894418-30894211) | |
| 405-612, gnl|canFam2|chr5 (65940167-65940404) | |
| 405-612, gnl|danRer3|chr23 (41214584-41214825) | |
| 405-612, gnl|dasNov1|scaffold_14797 (7600-7824) | |
| 405-612, gnl|echTel1|scaffold_210017 (201-425) | |
| 405-612, gnl|fr1|chrUn (44973927-44974175) | |
| 405-612, gnl|galGal2|chr21 (3354079-3354314) | |
| 405-612, gnl|hg17|chr1 (9729258-9729493) | |
| 405-612, gnl|Hg17|chr1 (9729501-9729294) | |
| 405-612, gnl|loxAfr1|scaffold_6952 (42790-43027) | |
| 405-612, gnl|mm7|chr4 (148633758-148633521) | |
| 405-612, gnl|Mm7|chr4 (148633511-148633718) | |
| 405-612, gnl|monDom2|scaffold_177 (1022773-1022544) | |
| 405-612, gnl|oryCun1|scaffold_145956 (1727-1963) | |
| 405-612, gnl|panTro1|chr1 (9749828-9750063) | |
| 405-612, gnl|rheMac2|chr1 (12791032-12791267) | |
| 405-612, gnl|rn3|chr5 (166740474-166740237) | |
| 405-612, gnl|tetNig1|chr9 (2514065-2514318) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.267344) | |
| csp (0.161186) | |
| cty (0.10408) |