Non-Coding RNA Search

Ss1.1-rplac_2773.5

Sequence:


               
               CCAACCGCCCCAGCCACCGACTGCGCGTCTTGCGGCCCCGAGCCCGACCCCGCGGTCCCT
CTGCCCCATGAAACTGGCCGCGATGATCAAGAAGATGCGCCCGAGCGACTCGGAGCTGAG
TATCCCGGCCAAGCACTGCTACCGCATGGTGGTCCTCGGCTCGCCCAAGGTGGGCAAGAC
GGCCATCGTGTCGCGCTTCCTCACGGGCCGCTTCGAGGACGCCTACACGCCCACCGTCGA
GGACTTCCACCGCAAGTTCTACCGCATTCGCGGCGAAGTCTACCAGCTGGACATCCTCGA
CACGTCCGGCAACCACCCGTTCCCCGCCATGCGGCGCCTCTCCATCCTCACAGGAGACGT
GTTCATCCTGGTGTTCAGTCTGGACAACCGCGACTCCTTCGAGGAGGTGCAGAGGCTCAA
GCAGCAGATCCTCGACACCAAGTCCTGCCTCAAGAACAAGACCAAGAAGAACGTGGACGT
GCCCCTGGTCATCTGCGGCAACAAAGGGGACCGGGACTTCCACCGCGAGGTGGAGCGGCG
CGAGATCGAGCAGCTGGTGGGCGCCGACTCCCGGTGCTGCGCCTACTTCGAGATCTCGGC
CAAGAGGAACAGCAGCCTGGACCAGATGTTCCGCGCGCTCTTCGCCATGGCCAAGCTGCC
GTGCGAGATGAGCCCGGACCTGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCAACCGCCCCAGCCACCGACTGCGCGTCTTGCGGCCCCGAGCCCGACCCCGCGGTCCCT
CTGCCCCATGAAACTGGCCGCGATGATCAAGAAGATGCGCCCGAGCGACTCGGAGCTGAG
TATCCCGGCCAAGCACTGCTACCGCATGGTGGTCCTCGGCTCGCCCAAGGTGGGCAAGAC
GGCCATCGTGTCGCGCTTCCTCACGGGCCGCTTCGAGGACGCCTACACGCCCACCGTCGA
GGACTTCCACCGCAAGTTCTACCGCATTCGCGGCGAAGTCTACCAGCTGGACATCCTCGA
CACGTCCGGCAACCACCCGTTCCCCGCCATGCGGCGCCTCTCCATCCTCACAGGAGACGT
GTTCATCCTGGTGTTCAGTCTGGACAACCGCGACTCCTTCGAGGAGGTGCAGAGGCTCAA
GCAGCAGATCCTCGACACCAAGTCCTGCCTCAAGAACAAGACCAAGAAGAACGTGGACGT
GCCCCTGGTCATCTGCGGCAACAAAGGGGACCGGGACTTCCACCGCGAGGTGGAGCGGCG
CGAGATCGAGCAGCTGGTGGGCGCCGACTCCCGGTGCTGCGCCTACTTCGAGATCTCGGC
CAAGAGGAACAGCAGCCTGGACCAGATGTTCCGCGCGCTCTTCGCCATGGCCAAGCTGCC
GTGCGAGATGAGCCCGGACCTGCA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|34870797|ref|XP_340810.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|34870797|ref|XP_340810.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-357, gnl|bosTau2|chr19 (26429804-26430156)
               

               
               6-357, gnl|Hg17|chr17 (17340297-17339931)
               

               
               6-357, gnl|Mm7|chr11 (60046420-60046074)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-357, gnl|bosTau2|chr19 (26429804-26430156)
               

               
               6-357, gnl|Hg17|chr17 (17340297-17339931)
               

               
               6-357, gnl|Mm7|chr11 (60046420-60046074)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.401016)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.401016)

	6-357, gnl\|bosTau2\|chr19 (26429804-26430156)
	6-357, gnl\|Hg17\|chr17 (17340297-17339931)
	6-357, gnl\|Mm7\|chr11 (60046420-60046074)