Non-Coding RNA Search

Ss1.1-rplac_3279.5

Sequence:


               
               GAAGCACAGTCTCTGTTAGGTGTCACTGTACTTCTTGCAGGTCACATAGTCCAAGAATTA
TTTTGCAGTTTTAAAACTAAATTTTTATTACATAAATTTTATATAAAAGTATATAAAAGA
AAAATTCAGTCCTATAGCACTGATGACATATGTTTTTCCAAACATCTCTTTGTTCCCATA
AGCACATAAGCAGATAATATTTGTACAGTCTTTTAAATGACTGGTTTTTTTTTCTTAGGT
GGAAAAAACCCCCAAAACCTAACTTAAATAAATGCCCTGTTTAAGTTAACAGGATGAGCT
TTATGGTTTCTTTTCTTTCTTCCCCATCCCAGTTATTAGGTCCTTTGATGTCNACAAACC
TGGCTGTGAGGTTGATGATCTTAAAGGTGGTGTGGCCGGTGGTAGTATTTTAAAAGGAGT
ATTAAAGGTGAACTTGATTTTGACACTTCTGAATCAGAAAAGTATGGTAAAAATGAAATC
TCAAAGTTAACTTTTAAAACAAATTTTCTTTACTATTTTATATTTTAAATGTTTTTTAAT
CATACTTATGTTGTAGGTTACTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGCACAGTCTCTGTTAGGTGTCACTGTACTTCTTGCAGGTCACATAGTCCAAGAATTA
TTTTGCAGTTTTAAAACTAAATTTTTATTACATAAATTTTATATAAAAGTATATAAAAGA
AAAATTCAGTCCTATAGCACTGATGACATATGTTTTTCCAAACATCTCTTTGTTCCCATA
AGCACATAAGCAGATAATATTTGTACAGTCTTTTAAATGACTGGTTTTTTTTTCTTAGGT
GGAAAAAACCCCCAAAACCTAACTTAAATAAATGCCCTGTTTAAGTTAACAGGATGAGCT
TTATGGTTTCTTTTCTTTCTTCCCCATCCCAGTTATTAGGTCCTTTGATGTCNACAAACC
TGGCTGTGAGGTTGATGATCTTAAAGGTGGTGTGGCCGGTGGTAGTATTTTAAAAGGAGT
ATTAAAGGTGAACTTGATTTTGACACTTCTGAATCAGAAAAGTATGGTAAAAATGAAATC
TCAAAGTTAACTTTTAAAACAAATTTTCTTTACTATTTTATATTTTAAATGTTTTTTAAT
CATACTTATGTTGTAGGTTACTGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               254-443, gnl|bosTau2|chrX (37976375-37976184)
               

               
               254-443, gnl|Hg17|chrX (23843697-23843882)
               

               
               254-443, gnl|Mm7|chrX (89587723-89587506)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               254-443, gnl|bosTau2|chrX (37976375-37976184)
               

               
               254-443, gnl|Hg17|chrX (23843697-23843882)
               

               
               254-443, gnl|Mm7|chrX (89587723-89587506)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.267344)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.267344)

	254-443, gnl\|bosTau2\|chrX (37976375-37976184)
	254-443, gnl\|Hg17\|chrX (23843697-23843882)
	254-443, gnl\|Mm7\|chrX (89587723-89587506)