Non-Coding RNA Search

Ss1.1-rplac_3734.5

Sequence:


               
               ATTTGGTCAGTGGGACAGAGAATCTGGCAGAGGGATTTCCCTGGCGTCTACAGCACCATC
AACGCCCCCAGTGGTCCGAGACGGTCCAGCCCATCATGGAAGCACTTAGAGATGCTACCC
GGAGGCGCGCCTTCGCCCTGGGGTCTCAAGCCTACACCTCCATCGTCGCCGACGACTTCG
CAGCCTTCGTCGGCCTGCCTGTGGAGGAAGCTGTGAAAGGGGTGCTGGAGCAGGGGTGGC
CTCTCCAAGGGAAATGGGAACGGGAGGGCAAAGCACAGGTCCGCAGTCCTTCTCTGAAAC
CACTGGAACAGGATACGCTTGCTTTGACCTTGGGTGGTGTTTGTTCCTGAGAAAGGTGAC
AGAAACGCGCGTGTGCACAGCCCCCCCACCCCCACCTCCGGCTGGGTCGCCAAGCCCTGC
CGTGTGCGGACTGCCACCCGGCGGGCGTGGGGAGAGATGACACAGACCAGGTCACCTCAC
GTTTCACCACCACATGAGTTAGAATGTTCTGGTTTGTAGAGGCTTTTGAACTGAGGGAGG
GTAAATTTCAGCTTTGCATTTACCTTTAAAGCACTTTTTACCAAGGATAGGCACCAGTGA
AAGCTCTCCTAGAGCAGGAGCTTCGGAAAGGAATCCTTGGCCATTTTTATGACGTTGAAA
CTTGACTGTGTCTTTGAGACGTGCTCTTGTTGTCTGTGATTATCCAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTGGTCAGTGGGACAGAGAATCTGGCAGAGGGATTTCCCTGGCGTCTACAGCACCATC
AACGCCCCCAGTGGTCCGAGACGGTCCAGCCCATCATGGAAGCACTTAGAGATGCTACCC
GGAGGCGCGCCTTCGCCCTGGGGTCTCAAGCCTACACCTCCATCGTCGCCGACGACTTCG
CAGCCTTCGTCGGCCTGCCTGTGGAGGAAGCTGTGAAAGGGGTGCTGGAGCAGGGGTGGC
CTCTCCAAGGGAAATGGGAACGGGAGGGCAAAGCACAGGTCCGCAGTCCTTCTCTGAAAC
CACTGGAACAGGATACGCTTGCTTTGACCTTGGGTGGTGTTTGTTCCTGAGAAAGGTGAC
AGAAACGCGCGTGTGCACAGCCCCCCCACCCCCACCTCCGGCTGGGTCGCCAAGCCCTGC
CGTGTGCGGACTGCCACCCGGCGGGCGTGGGGAGAGATGACACAGACCAGGTCACCTCAC
GTTTCACCACCACATGAGTTAGAATGTTCTGGTTTGTAGAGGCTTTTGAACTGAGGGAGG
GTAAATTTCAGCTTTGCATTTACCTTTAAAGCACTTTTTACCAAGGATAGGCACCAGTGA
AAGCTCTCCTAGAGCAGGAGCTTCGGAAAGGAATCCTTGGCCATTTTTATGACGTTGAAA
CTTGACTGTGTCTTTGAGACGTGCTCTTGTTGTCTGTGATTATCCAGC

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               110-700, gnl|bosTau2|chr3 (83617201-83617800)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               110-700, gnl|bosTau2|chr3 (83617201-83617800)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)