Non-Coding RNA Search

Ss1.1-rplac_3868.5

Sequence:


               
               TATTCCCGCATCGCCTGGGCCTCCCGTACAAGCGCTCCCTGCGGAATCTCATGGCCGACT
ACCTCAGACAGATCATCCAGGACAATGTGGATGGGCACAGCTCCAGTGAGGATGCCAGTG
CCTGCATGCACCTGGTGATCTGGAAGATCCGAGAAGACGCCAAGACCAAGCGGTGACCGC
CGCCTGCCCGCCCACCTCTCCCGCAGCCCCGGCCCGTCCTCTACCCCAGGCCTCTTCCAA
AACAGTGCAATAAATCTCGAGAGCTAACCCTGTCCACATCGCCAAGACACGGAAAACCGA
GAATGGGAGGAGCCGGCGGCAGATAGCCCAACGCTGAGACTGACCCCACCCGGAGTCCCG
AGCCCCTGCCTTACCCCTCTCGCCCGTCCCTGCCTCCCTGCCCCAGACCTCTGTCCTCTG
GAGACTGCTGCTGACTTGACGGGCGAGGCCGGGACCACCCCACCCGGCACCCCAGCCGGG
CCCTGCTGGTACCTTGGGCGGAGGCGAGACCACTACTCCTGCCCCTTCTCGTGGGTGGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATTCCCGCATCGCCTGGGCCTCCCGTACAAGCGCTCCCTGCGGAATCTCATGGCCGACT
ACCTCAGACAGATCATCCAGGACAATGTGGATGGGCACAGCTCCAGTGAGGATGCCAGTG
CCTGCATGCACCTGGTGATCTGGAAGATCCGAGAAGACGCCAAGACCAAGCGGTGACCGC
CGCCTGCCCGCCCACCTCTCCCGCAGCCCCGGCCCGTCCTCTACCCCAGGCCTCTTCCAA
AACAGTGCAATAAATCTCGAGAGCTAACCCTGTCCACATCGCCAAGACACGGAAAACCGA
GAATGGGAGGAGCCGGCGGCAGATAGCCCAACGCTGAGACTGACCCCACCCGGAGTCCCG
AGCCCCTGCCTTACCCCTCTCGCCCGTCCCTGCCTCCCTGCCCCAGACCTCTGTCCTCTG
GAGACTGCTGCTGACTTGACGGGCGAGGCCGGGACCACCCCACCCGGCACCCCAGCCGGG
CCCTGCTGGTACCTTGGGCGGAGGCGAGACCACTACTCCTGCCCCTTCTCGTGGGTGGTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               87-468, gnl|bosTau2|chr7 (28273646-28274022)
               

               
               87-468, gnl|Hg17|chr19 (1767154-1766768)
               

               
               87-468, gnl|Mm7|chr10 (80331537-80331135)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               87-468, gnl|bosTau2|chr7 (28273646-28274022)
               

               
               87-468, gnl|Hg17|chr19 (1767154-1766768)
               

               
               87-468, gnl|Mm7|chr10 (80331537-80331135)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.401016)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.401016)

	87-468, gnl\|bosTau2\|chr7 (28273646-28274022)
	87-468, gnl\|Hg17\|chr19 (1767154-1766768)
	87-468, gnl\|Mm7\|chr10 (80331537-80331135)