Ss1.1-rplac_6002.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTTGCACATCTTCATGAACACAAGTCTGCTGTGAATCGCATCAGGTCTCTGATGAACATT CGCTTTTGCCACGTGTTCAAATGATGGTACGGTGAAAATCTGGAACAGTCAGAAGATGGA GGGGAAGACCACCACCACCAGATCTATTCTTACGTATAGCCGAATTGGAGGACGTGTCAA GACACTCACATTCTGCCAGGGTTCCCACTACTTGGCTATAGCATCTGATAATGGTGCTGT CCAGCTTCTTGGAATTGAGGCTTCTAAGCTGCCCAAGTCTCCTAAAATTCATCCTCTACA AAGCAGAGTTCTAGACCAGAAGGAGGATGGCTGTGTGGTGGACATGCATCACTTCAACTC TGGGGCACAGTCTGTGCTGGCCTATGCCACCGTGAACGGCGCACTGGTGGGCTGGGACCT CCGTTCGTCCAGCAATGCCTGGACACTAAGGCACGATCTGAAGTCGGGCCTCATCACTTC CTTTGCTGTGGACATCCACCAGTGCTGGCTCTGCATCGGGACAAGCAGCGGCACCATGGC GTGTTGGGACATGAGGTTCCAGCTGCCAATTTCCAGTCACTTCCACCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTTGCACATCTTCATGAACACAAGTCTGCTGTGAATCGCATCAGGTCTCTGATGAACATT CGCTTTTGCCACGTGTTCAAATGATGGTACGGTGAAAATCTGGAACAGTCAGAAGATGGA GGGGAAGACCACCACCACCAGATCTATTCTTACGTATAGCCGAATTGGAGGACGTGTCAA GACACTCACATTCTGCCAGGGTTCCCACTACTTGGCTATAGCATCTGATAATGGTGCTGT CCAGCTTCTTGGAATTGAGGCTTCTAAGCTGCCCAAGTCTCCTAAAATTCATCCTCTACA AAGCAGAGTTCTAGACCAGAAGGAGGATGGCTGTGTGGTGGACATGCATCACTTCAACTC TGGGGCACAGTCTGTGCTGGCCTATGCCACCGTGAACGGCGCACTGGTGGGCTGGGACCT CCGTTCGTCCAGCAATGCCTGGACACTAAGGCACGATCTGAAGTCGGGCCTCATCACTTC CTTTGCTGTGGACATCCACCAGTGCTGGCTCTGCATCGGGACAAGCAGCGGCACCATGGC GTGTTGGGACATGAGGTTCCAGCTGCCAATTTCCAGTCACTTCCACCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-141, gnl|bosTau2|chr1 (102005767-102005909) | |
| 1-141, gnl|canFam2|chr23 (30977694-30977880) | |
| 1-141, gnl|danRer3|chr16 (42340265-42340435) | |
| 1-141, gnl|dasNov1|scaffold_20740 (46174-45988) | |
| 1-141, gnl|echTel1|scaffold_294443 (42455-42643) | |
| 1-141, gnl|fr1|chrUn (272492011-272491840) | |
| 1-141, gnl|galGal2|chr2 (40707202-40707393) | |
| 1-141, gnl|hg17|chr3 (131905248-131905435) | |
| 1-141, gnl|Hg17|chr3 (131905407-131905265) | |
| 1-141, gnl|mm7|chr9 (105390314-105390133) | |
| 1-141, gnl|Mm7|chr9 (105390159-105390301) | |
| 1-141, gnl|monDom2|scaffold_7 (70205828-70205656) | |
| 1-141, gnl|oryCun1|scaffold_182026 (121599-121784) | |
| 1-141, gnl|panTro1|chr2 (133954285-133954472) | |
| 1-141, gnl|rheMac2|chr2 (156978832-156978645) | |
| 1-141, gnl|rn3|chr8 (110794145-110793964) | |
| 1-141, gnl|tetNig1|chrUn_random (84141372-84141543) | |
| 1-141, gnl|xenTro1|scaffold_1296 (206426-206246) | |
| 305-519, gnl|bosTau2|chr1 (102070912-102071126) | |
| 305-519, gnl|Hg17|chr3 (131887966-131887752) | |
| 305-519, gnl|Mm7|chr9 (105395599-105395813) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-141, gnl|bosTau2|chr1 (102005767-102005909) | |
| 1-141, gnl|canFam2|chr23 (30977694-30977880) | |
| 1-141, gnl|danRer3|chr16 (42340265-42340435) | |
| 1-141, gnl|dasNov1|scaffold_20740 (46174-45988) | |
| 1-141, gnl|echTel1|scaffold_294443 (42455-42643) | |
| 1-141, gnl|fr1|chrUn (272492011-272491840) | |
| 1-141, gnl|galGal2|chr2 (40707202-40707393) | |
| 1-141, gnl|hg17|chr3 (131905248-131905435) | |
| 1-141, gnl|Hg17|chr3 (131905407-131905265) | |
| 1-141, gnl|mm7|chr9 (105390314-105390133) | |
| 1-141, gnl|Mm7|chr9 (105390159-105390301) | |
| 1-141, gnl|monDom2|scaffold_7 (70205828-70205656) | |
| 1-141, gnl|oryCun1|scaffold_182026 (121599-121784) | |
| 1-141, gnl|panTro1|chr2 (133954285-133954472) | |
| 1-141, gnl|rheMac2|chr2 (156978832-156978645) | |
| 1-141, gnl|rn3|chr8 (110794145-110793964) | |
| 1-141, gnl|tetNig1|chrUn_random (84141372-84141543) | |
| 1-141, gnl|xenTro1|scaffold_1296 (206426-206246) | |
| 305-519, gnl|bosTau2|chr1 (102070912-102071126) | |
| 305-519, gnl|Hg17|chr3 (131887966-131887752) | |
| 305-519, gnl|Mm7|chr9 (105395599-105395813) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nca (0.136874) | |
| pla (0.133672) |