Non-Coding RNA Search

Ss1.1-rplac_6305.5

Sequence:


               
               GCACCCTTCGGCGAGCGCTGTTTGTTTAGGGCTCGGTGAGTCCAATCAGGAGCGCAGGCT
GCAGTTTTCCGGCAGAGCAGTAAGAGGCGCCTCCTCTCTCCTTTTTATTCACCAGCAGCA
CCGCGCAGACCCCGGACTCGCGCTCGCCGGCTGGCGCCTTCGGCCTCTCTCCACATTCGG
GAGCACACTCCTCCACCGCTGTTCTCCATGCGCTGCGCCCACCCCAGGAGCTAGAAGTCA
GCTTGGAGCAGCGCGGGACCGTGGATGGCCTTGACTGACGGCGGCTGGTGTCTGCCAAAG
CGCTTAGGGGCCGCGGCTGCGGACGCCGGCGACTCCGGAGGCTTTCCAGCGCGGGAGCCC
TCTACGCCGCCTTCCCCCATCTCCTCCTCTTCCTCCTGCTGCTCACGGGGTGGGGAGCGT
GGCCCCGGCGGCGCCAGCAACTGCAGGACGCCGCAGCTCGACACGGAGGCGGCGGCGGGA
CCCACAGCCCGCTCGCTGCTGCTCAACCCTTACGCCTCGCATCCCTTCGGGGCTCCTCAC
GGACCTTCGGCGCCCGGGATCTCTGCCCCCGGGGGCGCCCTGTCGAGCTGGGAGGACCTA
TTGCTCTTCACTGACCTCGACCAGGCCGCGACCGCCAGCAAGCTGCTGTGGTCCAGCCGC
GGCGCCAAGCTGAGCCCTTTCGCACCCGAGCAGCCGGAGGAGATGTACCAGACCCTCGCA
GCCCTCTCCAGCCAGGGGCCCGCCGCTTACGACGGAGCGCCCGGCGGCTTCGTGCACTCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCACCCTTCGGCGAGCGCTGTTTGTTTAGGGCTCGGTGAGTCCAATCAGGAGCGCAGGCT
GCAGTTTTCCGGCAGAGCAGTAAGAGGCGCCTCCTCTCTCCTTTTTATTCACCAGCAGCA
CCGCGCAGACCCCGGACTCGCGCTCGCCGGCTGGCGCCTTCGGCCTCTCTCCACATTCGG
GAGCACACTCCTCCACCGCTGTTCTCCATGCGCTGCGCCCACCCCAGGAGCTAGAAGTCA
GCTTGGAGCAGCGCGGGACCGTGGATGGCCTTGACTGACGGCGGCTGGTGTCTGCCAAAG
CGCTTAGGGGCCGCGGCTGCGGACGCCGGCGACTCCGGAGGCTTTCCAGCGCGGGAGCCC
TCTACGCCGCCTTCCCCCATCTCCTCCTCTTCCTCCTGCTGCTCACGGGGTGGGGAGCGT
GGCCCCGGCGGCGCCAGCAACTGCAGGACGCCGCAGCTCGACACGGAGGCGGCGGCGGGA
CCCACAGCCCGCTCGCTGCTGCTCAACCCTTACGCCTCGCATCCCTTCGGGGCTCCTCAC
GGACCTTCGGCGCCCGGGATCTCTGCCCCCGGGGGCGCCCTGTCGAGCTGGGAGGACCTA
TTGCTCTTCACTGACCTCGACCAGGCCGCGACCGCCAGCAAGCTGCTGTGGTCCAGCCGC
GGCGCCAAGCTGAGCCCTTTCGCACCCGAGCAGCCGGAGGAGATGTACCAGACCCTCGCA
GCCCTCTCCAGCCAGGGGCCCGCCGCTTACGACGGAGCGCCCGGCGGCTTCGTGCACTCG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|5764030|emb|CAB53342.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|5764030|emb|CAB53342.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               225-780, gnl|bosTau2|chr3 (80013243-80013804)
               

               
               225-780, gnl|Hg17|chr18 (18005064-18005619)
               

               
               225-780, gnl|Mm7|chr18 (11260583-11261138)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               225-780, gnl|bosTau2|chr3 (80013243-80013804)
               

               
               225-780, gnl|Hg17|chr18 (18005064-18005619)
               

               
               225-780, gnl|Mm7|chr18 (11260583-11261138)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (1.06938)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (1.06938)

	225-780, gnl\|bosTau2\|chr3 (80013243-80013804)
	225-780, gnl\|Hg17\|chr18 (18005064-18005619)
	225-780, gnl\|Mm7\|chr18 (11260583-11261138)