Ss1.1-rplac_6379.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCATGGCTCGGTGGCCGGCCGCTAGCAGCGCGGCAGCCCGGGCTCCCGGGCCGGCATGAG GACGGCCACGGGGGAACGAGTGCGGCCCGCGGGGCCGTAGCCTGCGTCGCGCCGGGGACA AAGAAGCCATGCAGTGACACCTACTAAGACTTGTTGGTAGCCATGTCGGAGCCCCACAGG GTCCAGTTCACCTCTCTCCCGGGTCCTCTGAATCCTGCGTTTTTGAAGAAATCCCGGAAA GAGGAGGTTGGGGGAGTAGAACAGCATCAGGACTCTGAGCCGGCTGCAGCAGCTGTTCGG ATTACACTCACCCTCTTTGAGCCAGATCACAAGCGATGCCCAGAGTTCTTCTACCCAGAG CTGGTGAAAAACTTGCGAGGGAAGGTGAAAGGACTTCAGCCGGCAGACAAGAAGAAAGAT ATCTTGGATCCTTTCAATGATGAAGACAAAGAAAGGCATAAAGTGGAGGCCCTTGCTCGG AAATTTGAAGAAAAATATGGTGGAAAGAAACGTAGAAAAGACCGAATACAGGACTTGATT GATATGGGTTATGGTTATGATGAATCTGATTCCTTCATCGATAACTCTGAGGCGTATGAT GAGCTCGTTCCTGCTTCTTTGACTACAAAGTACGGAGGATTTTACATTAACTCGGGAACC TTGCAGTTTAGACAAGCATCAGAATCTGAGGATGACTTCATTAAAGAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCATGGCTCGGTGGCCGGCCGCTAGCAGCGCGGCAGCCCGGGCTCCCGGGCCGGCATGAG GACGGCCACGGGGGAACGAGTGCGGCCCGCGGGGCCGTAGCCTGCGTCGCGCCGGGGACA AAGAAGCCATGCAGTGACACCTACTAAGACTTGTTGGTAGCCATGTCGGAGCCCCACAGG GTCCAGTTCACCTCTCTCCCGGGTCCTCTGAATCCTGCGTTTTTGAAGAAATCCCGGAAA GAGGAGGTTGGGGGAGTAGAACAGCATCAGGACTCTGAGCCGGCTGCAGCAGCTGTTCGG ATTACACTCACCCTCTTTGAGCCAGATCACAAGCGATGCCCAGAGTTCTTCTACCCAGAG CTGGTGAAAAACTTGCGAGGGAAGGTGAAAGGACTTCAGCCGGCAGACAAGAAGAAAGAT ATCTTGGATCCTTTCAATGATGAAGACAAAGAAAGGCATAAAGTGGAGGCCCTTGCTCGG AAATTTGAAGAAAAATATGGTGGAAAGAAACGTAGAAAAGACCGAATACAGGACTTGATT GATATGGGTTATGGTTATGATGAATCTGATTCCTTCATCGATAACTCTGAGGCGTATGAT GAGCTCGTTCCTGCTTCTTTGACTACAAAGTACGGAGGATTTTACATTAACTCGGGAACC TTGCAGTTTAGACAAGCATCAGAATCTGAGGATGACTTCATTAAAGAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 122-411, gnl|bosTau2|chr25 (4741547-4741836) | |
| 122-411, gnl|Hg17|chr16 (4842879-4843168) | |
| 122-411, gnl|Mm7|chr16 (4728436-4728725) | |
| 594-720, gnl|bosTau2|chr25 (4746115-4746241) | |
| 594-720, gnl|canFam2|chr6 (39613807-39613689) | |
| 594-720, gnl|canFam2|chrX (38395876-38395989) | |
| 594-720, gnl|danRer3|chr6 (3367711-3367827) | |
| 594-720, gnl|dasNov1|scaffold_30506 (10618-10736) | |
| 594-720, gnl|dasNov1|scaffold_30506 (10636-10751) | |
| 594-720, gnl|echTel1|scaffold_203481 (7895-7778) | |
| 594-720, gnl|echTel1|scaffold_203481 (7878-7763) | |
| 594-720, gnl|fr1|chrUn (175212965-175213082) | |
| 594-720, gnl|galGal2|chr14 (1861971-1861851) | |
| 594-720, gnl|galGal2|chr14 (1861951-1861835) | |
| 594-720, gnl|hg17|chr16 (4849011-4849128) | |
| 594-720, gnl|Hg17|chr16 (4849026-4849152) | |
| 594-720, gnl|hg17|chrX (44083043-44083159) | |
| 594-720, gnl|loxAfr1|scaffold_2336 (58011-58125) | |
| 594-720, gnl|loxAfr1|scaffold_94311 (4646-4531) | |
| 594-720, gnl|mm7|chr16 (4736286-4736402) | |
| 594-720, gnl|mm7|chr16 (4736302-4736417) | |
| 594-720, gnl|Mm7|chr16 (4736300-4736426) | |
| 594-720, gnl|monDom2|scaffold_17 (42616785-42616667) | |
| 594-720, gnl|monDom2|scaffold_17 (42616767-42616652) | |
| 594-720, gnl|oryCun1|scaffold_190118 (16645-16745) | |
| 594-720, gnl|oryCun1|scaffold_190118 (16645-16760) | |
| 594-720, gnl|panTro1|chr18 (4799870-4799987) | |
| 594-720, gnl|panTro1|chr18 (4799891-4800002) | |
| 594-720, gnl|rheMac2|chr20 (5030113-5030230) | |
| 594-720, gnl|rheMac2|chrX (42210826-42210941) | |
| 594-720, gnl|rn3|chr10 (10636696-10636579) | |
| 594-720, gnl|rn3|chr10 (10636679-10636565) | |
| 594-720, gnl|tetNig1|chrUn_random (27318803-27318700) | |
| 594-720, gnl|xenTro1|scaffold_409 (268054-267940) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 122-411, gnl|bosTau2|chr25 (4741547-4741836) | |
| 122-411, gnl|Hg17|chr16 (4842879-4843168) | |
| 122-411, gnl|Mm7|chr16 (4728436-4728725) | |
| 594-720, gnl|bosTau2|chr25 (4746115-4746241) | |
| 594-720, gnl|canFam2|chr6 (39613807-39613689) | |
| 594-720, gnl|canFam2|chrX (38395876-38395989) | |
| 594-720, gnl|danRer3|chr6 (3367711-3367827) | |
| 594-720, gnl|dasNov1|scaffold_30506 (10618-10736) | |
| 594-720, gnl|dasNov1|scaffold_30506 (10636-10751) | |
| 594-720, gnl|echTel1|scaffold_203481 (7895-7778) | |
| 594-720, gnl|echTel1|scaffold_203481 (7878-7763) | |
| 594-720, gnl|fr1|chrUn (175212965-175213082) | |
| 594-720, gnl|galGal2|chr14 (1861971-1861851) | |
| 594-720, gnl|galGal2|chr14 (1861951-1861835) | |
| 594-720, gnl|hg17|chr16 (4849011-4849128) | |
| 594-720, gnl|Hg17|chr16 (4849026-4849152) | |
| 594-720, gnl|hg17|chrX (44083043-44083159) | |
| 594-720, gnl|loxAfr1|scaffold_2336 (58011-58125) | |
| 594-720, gnl|loxAfr1|scaffold_94311 (4646-4531) | |
| 594-720, gnl|mm7|chr16 (4736286-4736402) | |
| 594-720, gnl|mm7|chr16 (4736302-4736417) | |
| 594-720, gnl|Mm7|chr16 (4736300-4736426) | |
| 594-720, gnl|monDom2|scaffold_17 (42616785-42616667) | |
| 594-720, gnl|monDom2|scaffold_17 (42616767-42616652) | |
| 594-720, gnl|oryCun1|scaffold_190118 (16645-16745) | |
| 594-720, gnl|oryCun1|scaffold_190118 (16645-16760) | |
| 594-720, gnl|panTro1|chr18 (4799870-4799987) | |
| 594-720, gnl|panTro1|chr18 (4799891-4800002) | |
| 594-720, gnl|rheMac2|chr20 (5030113-5030230) | |
| 594-720, gnl|rheMac2|chrX (42210826-42210941) | |
| 594-720, gnl|rn3|chr10 (10636696-10636579) | |
| 594-720, gnl|rn3|chr10 (10636679-10636565) | |
| 594-720, gnl|tetNig1|chrUn_random (27318803-27318700) | |
| 594-720, gnl|xenTro1|scaffold_409 (268054-267940) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (1.20305) | |
| cte (0.29274) |