Ss1.1-rplac_6386.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCTACACAGATCATTCCTGGAAAAGGTACCTCATGGGGCGTAACGATTTTCTTTTTCCC CTGTTTTGGTTAGCTCATAGGGGCTGCTAGTTTGGTTACTTTATGGAGTATAATTACTTT CTAACTTTATTTTAGTATGTACCATAAATTATCCAGAAATAATTATTAAATACTGTCCCC AAACTTTTTGATAAAGGCCTTGTAAATAATTTTGTAGGAAAGGAAATGGCACTTTTGGGG GAAGGCATACTTAGGAAGAAAAGGAGGGAATGTAAGCCCCTTAGAGTATTATGCGAAAAA AAGTTCTCCTTTTGGAAATAGCAGTTGGTTGAGATGTGTGAAGAGTCAGATACATGAACC AGAGAACCTCATGCCTACACAGATCATTCCTGGAAAAGCCCTCTATGATGTTGGAGACAT TGTTCATTCTGTAAGAGCAAAATGGGGAATAAAGGCAAATTGTCCCTGTTCAAACAGGCA ATTCAAACTCTTTTCAAAGCCAGCCTCAAAGGAAGACATAAAACAGACTTCCTTAGCTGG AGAAAAATCGACTCTTGGTGCCGTGCCCCCACAGAATCCCTCAGCGTTGGAACCAGCGGC TGTGGGTGGGGAAGCTGCCTCCAAGCCCGCCAACAGCGTGAAGCCTGCCTGTCCAGCCAG CACCTCTCCTTTGAACTGGCTGGCAGACCTGACCAGCGGGAATGTCAACAAAGAAAACAA GGAAAAACAGCCAACGATGCCAATTTTAAAGAATGAAATCAAATGCCTTCCACCCCTCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCTACACAGATCATTCCTGGAAAAGGTACCTCATGGGGCGTAACGATTTTCTTTTTCCC CTGTTTTGGTTAGCTCATAGGGGCTGCTAGTTTGGTTACTTTATGGAGTATAATTACTTT CTAACTTTATTTTAGTATGTACCATAAATTATCCAGAAATAATTATTAAATACTGTCCCC AAACTTTTTGATAAAGGCCTTGTAAATAATTTTGTAGGAAAGGAAATGGCACTTTTGGGG GAAGGCATACTTAGGAAGAAAAGGAGGGAATGTAAGCCCCTTAGAGTATTATGCGAAAAA AAGTTCTCCTTTTGGAAATAGCAGTTGGTTGAGATGTGTGAAGAGTCAGATACATGAACC AGAGAACCTCATGCCTACACAGATCATTCCTGGAAAAGCCCTCTATGATGTTGGAGACAT TGTTCATTCTGTAAGAGCAAAATGGGGAATAAAGGCAAATTGTCCCTGTTCAAACAGGCA ATTCAAACTCTTTTCAAAGCCAGCCTCAAAGGAAGACATAAAACAGACTTCCTTAGCTGG AGAAAAATCGACTCTTGGTGCCGTGCCCCCACAGAATCCCTCAGCGTTGGAACCAGCGGC TGTGGGTGGGGAAGCTGCCTCCAAGCCCGCCAACAGCGTGAAGCCTGCCTGTCCAGCCAG CACCTCTCCTTTGAACTGGCTGGCAGACCTGACCAGCGGGAATGTCAACAAAGAAAACAA GGAAAAACAGCCAACGATGCCAATTTTAAAGAATGAAATCAAATGCCTTCCACCCCTCCC |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-283, gnl|bosTau2|chr11 (35200107-35200392) | |
| 1-283, gnl|Hg17|chr2 (86617021-86617284) | |
| 1-283, gnl|Mm7|chr6 (71618448-71618182) | |
| 397-526, gnl|bosTau2|chr11 (35200745-35200874) | |
| 397-526, gnl|canFam2|chr17 (41773446-41773326) | |
| 397-526, gnl|danRer3|chrNA (164388082-164388183) | |
| 397-526, gnl|dasNov1|scaffold_9396 (31185-31086) | |
| 397-526, gnl|echTel1|scaffold_320047 (85203-85323) | |
| 397-526, gnl|galGal2|chr4 (85688817-85688948) | |
| 397-526, gnl|hg17|chr2 (86617371-86617484) | |
| 397-526, gnl|Hg17|chr2 (86617387-86617516) | |
| 397-526, gnl|loxAfr1|scaffold_30995 (9915-9793) | |
| 397-526, gnl|mm7|chr6 (71618093-71617979) | |
| 397-526, gnl|Mm7|chr6 (71618074-71617945) | |
| 397-526, gnl|monDom2|scaffold_63 (765212-765325) | |
| 397-526, gnl|oryCun1|scaffold_162175 (299-412) | |
| 397-526, gnl|panTro1|chr12 (89499489-89499602) | |
| 397-526, gnl|rheMac2|chr13 (87054593-87054704) | |
| 397-526, gnl|rn3|chr4 (105123262-105123148) | |
| 397-526, gnl|tetNig1|chr1 (964316-964423) | |
| 397-526, gnl|xenTro1|scaffold_230 (1153948-1153835) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-283, gnl|bosTau2|chr11 (35200107-35200392) | |
| 1-283, gnl|Hg17|chr2 (86617021-86617284) | |
| 1-283, gnl|Mm7|chr6 (71618448-71618182) | |
| 397-526, gnl|bosTau2|chr11 (35200745-35200874) | |
| 397-526, gnl|canFam2|chr17 (41773446-41773326) | |
| 397-526, gnl|danRer3|chrNA (164388082-164388183) | |
| 397-526, gnl|dasNov1|scaffold_9396 (31185-31086) | |
| 397-526, gnl|echTel1|scaffold_320047 (85203-85323) | |
| 397-526, gnl|galGal2|chr4 (85688817-85688948) | |
| 397-526, gnl|hg17|chr2 (86617371-86617484) | |
| 397-526, gnl|Hg17|chr2 (86617387-86617516) | |
| 397-526, gnl|loxAfr1|scaffold_30995 (9915-9793) | |
| 397-526, gnl|mm7|chr6 (71618093-71617979) | |
| 397-526, gnl|Mm7|chr6 (71618074-71617945) | |
| 397-526, gnl|monDom2|scaffold_63 (765212-765325) | |
| 397-526, gnl|oryCun1|scaffold_162175 (299-412) | |
| 397-526, gnl|panTro1|chr12 (89499489-89499602) | |
| 397-526, gnl|rheMac2|chr13 (87054593-87054704) | |
| 397-526, gnl|rn3|chr4 (105123262-105123148) | |
| 397-526, gnl|tetNig1|chr1 (964316-964423) | |
| 397-526, gnl|xenTro1|scaffold_230 (1153948-1153835) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| hyp (0.142837) | |
| pla (0.133672) |