Ss1.1-rplac_6687.5
|
GCCGAGGACCCTCTGGAGCTCCCGGTGCCGACGGACCGCAAGGTCCCCCTGGCGGAATAG
GCAACCCCGGCGCAGTGGGAGAGAAGGGTGAGCCCGGCGAAGCGGGAGAGCCCGGCCTTC
CCGGAGAAGGAGGCCCCCCGGGACCCAAAGGCGAAAGAGGAGAGAAGGGCGAGTCGGGCC
CTTCTGGTGCTGCTGGACCCCCTGGACCCAAGGGCCCCCCCGGAGACGACGGTCCCAAAG
GCAGCCCCGGCCCTGTCGGTTTTCCTGGAGATCCCGGTCCCCCCGGAGAGCCTGGCCCCG
CGGGTCAAGACGGTCCCCCTGGTGACAAAGGAGATGACGGTGAACCCGGGCAAACAGGAT
CCCCGGGCCCTACTGGTGAGCCAGGTCCATCTGGGCCTCCAGGGAAAAGGGGTCCGCCCG
GCCCCGCAGGCCCCGAAGGCAGACAGGGAGAGAAAGGAGCCAAGGGAGAAGCCGGCTTGG
AAGGCCCTCCTGGGAAGACTGGCCCCATTGGCCCCCAGGGGGCCCCGGGGAAGCCTGGTC
CTGATGGCCTTCGAGGGATCCCCGGCCCCGTGGGCGAGCAAGGTCTCCCAGGAGCTCCCG
GCCCGGATGGTCCCCCCGGCCCCATGGGTCCCCCAGGGCTCCCCGGCCTCAAAGGAGATT
CTGGACCCAAAGGGGAAAAGGGCCATCCAGGCTTGATCGGGCTCATTGGACCCCCGGGCG |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCCGAGGACCCTCTGGAGCTCCCGGTGCCGACGGACCGCAAGGTCCCCCTGGCGGAATAG
GCAACCCCGGCGCAGTGGGAGAGAAGGGTGAGCCCGGCGAAGCGGGAGAGCCCGGCCTTC
CCGGAGAAGGAGGCCCCCCGGGACCCAAAGGCGAAAGAGGAGAGAAGGGCGAGTCGGGCC
CTTCTGGTGCTGCTGGACCCCCTGGACCCAAGGGCCCCCCCGGAGACGACGGTCCCAAAG
GCAGCCCCGGCCCTGTCGGTTTTCCTGGAGATCCCGGTCCCCCCGGAGAGCCTGGCCCCG
CGGGTCAAGACGGTCCCCCTGGTGACAAAGGAGATGACGGTGAACCCGGGCAAACAGGAT
CCCCGGGCCCTACTGGTGAGCCAGGTCCATCTGGGCCTCCAGGGAAAAGGGGTCCGCCCG
GCCCCGCAGGCCCCGAAGGCAGACAGGGAGAGAAAGGAGCCAAGGGAGAAGCCGGCTTGG
AAGGCCCTCCTGGGAAGACTGGCCCCATTGGCCCCCAGGGGGCCCCGGGGAAGCCTGGTC
CTGATGGCCTTCGAGGGATCCCCGGCCCCGTGGGCGAGCAAGGTCTCCCAGGAGCTCCCG
GCCCGGATGGTCCCCCCGGCCCCATGGGTCCCCCAGGGCTCCCCGGCCTCAAAGGAGATT
CTGGACCCAAAGGGGAAAAGGGCCATCCAGGCTTGATCGGGCTCATTGGACCCCCGGGCG |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
463-573, gnl|bosTau2|chr11 (86747817-86747707) |
|
463-573, gnl|canFam2|chr9 (54176682-54176801) |
|
463-573, gnl|danRer3|chr19 (2008711-2008596) |
|
463-573, gnl|echTel1|scaffold_213722 (4174-4290) |
|
463-573, gnl|fr1|chrUn (30939877-30939758) |
|
463-573, gnl|galGal2|chr17 (2876801-2876682) |
|
463-573, gnl|hg17|chr9 (134936443-134936562) |
|
463-573, gnl|Hg17|chr9 (134936445-134936555) |
|
463-573, gnl|loxAfr1|scaffold_20920 (7424-7305) |
|
463-573, gnl|mm7|chr2 (28024402-28024521) |
|
463-573, gnl|Mm7|chr2 (28024404-28024514) |
|
463-573, gnl|monDom2|scaffold_51 (12315221-12315340) |
|
463-573, gnl|oryCun1|scaffold_107844 (1327-1446) |
|
463-573, gnl|panTro1|chr11 (119824123-119824242) |
|
463-573, gnl|rheMac2|chr15 (3479930-3479811) |
|
463-573, gnl|rn3|chr3 (6953398-6953517) |
|
463-573, gnl|tetNig1|chrUn_random (2584592-2584473) |
|
463-573, gnl|xenTro1|scaffold_95 (1370951-1370832) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
463-573, gnl|bosTau2|chr11 (86747817-86747707) |
|
463-573, gnl|canFam2|chr9 (54176682-54176801) |
|
463-573, gnl|danRer3|chr19 (2008711-2008596) |
|
463-573, gnl|echTel1|scaffold_213722 (4174-4290) |
|
463-573, gnl|fr1|chrUn (30939877-30939758) |
|
463-573, gnl|galGal2|chr17 (2876801-2876682) |
|
463-573, gnl|hg17|chr9 (134936443-134936562) |
|
463-573, gnl|Hg17|chr9 (134936445-134936555) |
|
463-573, gnl|loxAfr1|scaffold_20920 (7424-7305) |
|
463-573, gnl|mm7|chr2 (28024402-28024521) |
|
463-573, gnl|Mm7|chr2 (28024404-28024514) |
|
463-573, gnl|monDom2|scaffold_51 (12315221-12315340) |
|
463-573, gnl|oryCun1|scaffold_107844 (1327-1446) |
|
463-573, gnl|panTro1|chr11 (119824123-119824242) |
|
463-573, gnl|rheMac2|chr15 (3479930-3479811) |
|
463-573, gnl|rn3|chr3 (6953398-6953517) |
|
463-573, gnl|tetNig1|chrUn_random (2584592-2584473) |
|
463-573, gnl|xenTro1|scaffold_95 (1370951-1370832) |
|
pla (0.133672) |
|
eep (0.122564) |
|
pla (0.133672) |
|
eep (0.122564) |
