Non-Coding RNA Search

Ss1.1-rplac_7673.5

Sequence:


               
               GGCTGCGCTCACAGTTTCCTCCGGCGGCATGTAAAGGCTCCACAAAGGAGTTGGGAGTTC
AAATGAGGCTGCTGCAGTCGGCCTGAGGCTGGACCCCGAGCCCTGAGCAGTGCTGCCTGA
GTTCTGGACCTGCAGAGCATGGCACTGAGGCAGCTGCCGGCCCCCGCCGGAGAAGGCAGG
CCGTGAGCCGCCGGCAGGACCCCCGGCCAGCCCCCCGCCCTGTCCGGCTGGCTGCAGCCC
CGCGGTGGGGGCAGAGCAGAGCAAGCAGAGGCCAGTGAGGCAGGGCTGCTCGGCGGCCGG
GCCGGCCTGCGACGCGGGGACCCCTCTGGGAGGCCATGGCCAGGCTGCCCTGCTGACGGC
CGAGGTGAAGCATGTGAGGAGCTGCCCGGGAGCCAGGCAGGAGGGAAGAGGTTTTCATAG
GCTCTGTTCACCAAGAAGAACCATCATTGTGCAAGGACCATGCGGCCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTGCGCTCACAGTTTCCTCCGGCGGCATGTAAAGGCTCCACAAAGGAGTTGGGAGTTC
AAATGAGGCTGCTGCAGTCGGCCTGAGGCTGGACCCCGAGCCCTGAGCAGTGCTGCCTGA
GTTCTGGACCTGCAGAGCATGGCACTGAGGCAGCTGCCGGCCCCCGCCGGAGAAGGCAGG
CCGTGAGCCGCCGGCAGGACCCCCGGCCAGCCCCCCGCCCTGTCCGGCTGGCTGCAGCCC
CGCGGTGGGGGCAGAGCAGAGCAAGCAGAGGCCAGTGAGGCAGGGCTGCTCGGCGGCCGG
GCCGGCCTGCGACGCGGGGACCCCTCTGGGAGGCCATGGCCAGGCTGCCCTGCTGACGGC
CGAGGTGAAGCATGTGAGGAGCTGCCCGGGAGCCAGGCAGGAGGGAAGAGGTTTTCATAG
GCTCTGTTCACCAAGAAGAACCATCATTGTGCAAGGACCATGCGGCCG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-412, gnl|bosTau2|chr11 (74864900-74865296)
               

               
               1-412, gnl|Hg17|chr9 (126964527-126964146)
               

               
               1-412, gnl|Mm7|chr2 (33223368-33223766)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-412, gnl|bosTau2|chr11 (74864900-74865296)
               

               
               1-412, gnl|Hg17|chr9 (126964527-126964146)
               

               
               1-412, gnl|Mm7|chr2 (33223368-33223766)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.534688)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.534688)

	1-412, gnl\|bosTau2\|chr11 (74864900-74865296)
	1-412, gnl\|Hg17\|chr9 (126964527-126964146)
	1-412, gnl\|Mm7\|chr2 (33223368-33223766)